Description

Ensembl ID ENSOGAG00000007839 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 7076 bases Strand Minus strand
Position GL873771.1 : 1491866 - 1498941 RNA binding domain RBM1CTR , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSOGAP00000016564 RBM1CTR PF08081 5e-23 1
ENSOGAP00000016564 RRM_1 PF00076 1.1e-22 2
ENSOGAP00000007019 RBM1CTR PF08081 6.9e-23 1
ENSOGAP00000007019 RRM_1 PF00076 1.5e-22 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
RBMXL1-201 ENSOGAT00000026673 1959 391aa ENSOGAP00000016564
RBMXL1-202 ENSOGAT00000007842 1574 500aa ENSOGAP00000007019

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001579437.888226.087otolemur_garnettiiENSOGAP0000000701924.416.8
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001642836.811626.3768otolemur_garnettiiENSOGAP0000000701925.418.2
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001713336.387425.3927otolemur_garnettiiENSOGAP0000000701927.819.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000002224439.931726.9625otolemur_garnettiiENSOGAP0000000701923.415.8
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001977133.112619.8675otolemur_garnettiiENSOGAP000000070192012
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001022522.44912.5otolemur_garnettiiENSOGAP0000000701917.69.8
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000002077827.835117.5258otolemur_garnettiiENSOGAP0000000701916.210.2
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000223423.684215.0718otolemur_garnettiiENSOGAP0000000701919.812.6
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000002156131.277518.5022otolemur_garnettiiENSOGAP0000000701914.28.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000504816.88569.56848otolemur_garnettiiENSOGAP000000070191810.2
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001885315.580710.4816otolemur_garnettiiENSOGAP00000007019117.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001898215.85168.76897otolemur_garnettiiENSOGAP0000000701918.810.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000363128.732418.8732otolemur_garnettiiENSOGAP0000000701920.413.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000054110.30455.15223otolemur_garnettiiENSOGAP0000000701917.68.8
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000203021.951212.5436otolemur_garnettiiENSOGAP0000000701912.67.2
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000002044771.676358.9595otolemur_garnettiiENSOGAP0000000701924.820.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000002166271.794958.9744otolemur_garnettiiENSOGAP0000000701922.418.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001374541.076527.4788otolemur_garnettiiENSOGAP000000070192919.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001834236.148621.9595otolemur_garnettiiENSOGAP0000000701921.413
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000342131.780821.3699otolemur_garnettiiENSOGAP0000000701923.215.6
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001325314.74658.06452otolemur_garnettiiENSOGAP0000000701912.87
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001550631.024120.1807otolemur_garnettiiENSOGAP0000000701920.613.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000020836.519624.7549otolemur_garnettiiENSOGAP0000000701929.820.2
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001891347.520729.7521otolemur_garnettiiENSOGAP000000070192314.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001911946.923129.6154otolemur_garnettiiENSOGAP0000000701924.415.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001538948.828129.2969otolemur_garnettiiENSOGAP000000070192515
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000002136743.987327.2152otolemur_garnettiiENSOGAP0000000701927.817.2
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001742243.648226.7101otolemur_garnettiiENSOGAP0000000701926.816.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001896141.032626.3587otolemur_garnettiiENSOGAP0000000701930.219.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001609543.055626.7361otolemur_garnettiiENSOGAP0000000701924.815.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001967134.449822.488otolemur_garnettiiENSOGAP0000000701914.49.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000502435.504923.7785otolemur_garnettiiENSOGAP0000000701921.814.6
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001154915.70959.29054otolemur_garnettiiENSOGAP0000000701918.611
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000946522.250612.7877otolemur_garnettiiENSOGAP0000000701917.410
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001787737.552726.1603otolemur_garnettiiENSOGAP0000000701917.812.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001876514.38249.30626otolemur_garnettiiENSOGAP000000070191711
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000002125314.31019.54003otolemur_garnettiiENSOGAP0000000701916.811.2
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000002225382.442776.0814otolemur_garnettiiENSOGAP0000000701964.859.8
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001005412.35967.86517otolemur_garnettiiENSOGAP0000000701913.28.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001592013.22967.97665otolemur_garnettiiENSOGAP0000000701913.68.2
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001401522.465815.6164otolemur_garnettiiENSOGAP0000000701916.411.4
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000001401723.398316.4345otolemur_garnettiiENSOGAP0000000701916.811.8

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197673.8ornithorhynchus_anatinusENSOANP0000001848790.476287.8571
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197572.2sarcophilus_harrisiiENSSHAP0000002769389.285785.9524
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701971.467.8sarcophilus_harrisiiENSSHAP0000003061292.010387.3711
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701943.242notamacropus_eugeniiENSMEUP0000001451454.822353.2995
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.270.2notamacropus_eugeniiENSMEUP0000001261492.893489.0863
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701945.442dasypus_novemcinctusENSDNOP0000003320976.43170.7071
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701957.853.6dasypus_novemcinctusENSDNOP0000001691875.260469.7917
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701964.463.8echinops_telfairiENSETEP0000001068782.142981.3775
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701974.873.6macaca_fascicularisENSMFAP0000005249895.652294.1176
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701974.873.6macaca_mulattaENSMMUP0000006059995.652294.1176
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701977.276.8papio_anubisENSPANP0000001111098.721298.2097
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701966.465.2gorilla_gorillaENSGGOP000000453978078.5542
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701972.472gorilla_gorillaENSGGOP0000003369584.579484.1122
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.672.6pongo_abeliiENSPPYP0000003686971.317870.3488
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197473.2homo_sapiensENSP0000049824894.871893.8462
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701950.249.4canis_lupus_familiarisENSCAFP0084503080085.958984.589
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070194745.4vulpes_vulpesENSVVUP0000001289085.144982.2464
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701932.631panthera_leoENSPLOP0000002547788.58784.2391
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701957.256.6balaenoptera_musculusENSBMSP0001000581495.652294.6488
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197776.8bos_taurusENSBTAP0000001769698.465598.2097
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701976.475.6capra_hircusENSCHIP0000001146696.708995.6962
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197776.8ovis_aries_rambouilletENSOARP0002002019398.465598.2097
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701957.456.4oryctolagus_cuniculusENSOCUP0000003791891.693390.0958
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070196663.8urocitellus_parryiiENSUPAP0001001624870.967768.6021
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070195552.2cricetulus_griseus_chok1gshdENSCGRP0000100556181.602477.4481
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197675.4cricetulus_griseus_chok1gshdENSCGRP0000101226797.938197.1649
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701975.875.2mus_caroliMGP_CAROLIEiJ_P008507697.680496.9072
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197675.4mesocricetus_auratusENSMAUP0000001793397.938197.1649
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701975.875.2mus_musculusENSMUSP0000004815397.680496.9072
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701975.675mus_musculusENSMUSP0000015463397.422796.6495
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701975.875.2mus_pahariMGP_PahariEiJ_P005338097.680496.9072
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701975.875.2mus_spicilegusENSMSIP0000003526397.680496.9072
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701975.875rattus_norvegicusENSRNOP0000007950597.680496.6495
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197473.2rattus_norvegicusENSRNOP0000007464694.387893.3673
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197776.8cavia_porcellusENSCPOP0000001093798.465598.2097
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701975.875.4heterocephalus_glaber_femaleENSHGLP0000004931096.930996.4194
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701976.676.4heterocephalus_glaber_femaleENSHGLP0000001546197.95497.6982
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197572.4monodelphis_domesticaENSMODP0000005449595.177791.8782
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701970.667vombatus_ursinusENSVURP0001000041990.05185.4592
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197572.2vombatus_ursinusENSVURP0001002146495.419891.8575
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701970.269.6ursus_maritimusENSUMAP0000001447397.229996.3989
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197776.8bos_grunniensENSBGRP0000002950498.465598.2097
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070196158.8bos_indicus_hybridENSBIXP0000502271380.687877.7778
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701952.451microcebus_murinusENSMICP0000003795392.907890.4255
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070195957.4microcebus_murinusENSMICP0000004171793.650891.1111
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701974.474.2rhinopithecus_roxellanaENSRROP0000003539197.894797.6316
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701972.471.2rhinopithecus_roxellanaENSRROP0000001620695.013193.4383
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701957.257moschus_moschiferusENSMMSP0000000199196.296395.9596
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701952.650.4moschus_moschiferusENSMMSP0000002484287.959984.2809
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701956.856.6moschus_moschiferusENSMMSP0000000818495.622995.2862
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701956.255.2moschus_moschiferusENSMMSP0000001457993.355591.6944
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701964.664cebus_imitatorENSCCAP0000003906093.623292.7536
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701963.261.8cebus_imitatorENSCCAP0000001157888.268286.3129
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701975.474.8microtus_ochrogasterENSMOCP0000001928597.164996.3918
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197776.8chinchilla_lanigeraENSCLAP0000000315098.465598.2097
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197776.8aotus_nancymaaeENSANAP0000002118398.465598.2097
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701962.462.2sorex_araneusENSSARP0000000036098.422798.1073
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701955.653.4nomascus_leucogenysENSNLEP0000004164782.738179.4643
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197776.8bison_bison_bisonENSBBBP0000001595298.465598.2097
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197776.8cervus_hanglu_yarkandensisENSCHYP0000002528796.977396.7254
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701957.855.8prolemur_simusENSPSMP0000002928992.038288.8535
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197776.8bos_mutusENSBMUP0000000929398.465598.2097
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701977.277.2carlito_syrichtaENSTSYP0000003405898.721298.7212
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701975.875.2nannospalax_galiliENSNGAP0000001074697.680496.9072
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701954.454.2panthera_tigris_altaicaENSPTIP0000002594696.113195.7597
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197675.4peromyscus_maniculatus_bairdiiENSPEMP0000000402497.938197.1649
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197169.2saimiri_boliviensis_boliviensisENSSBOP0000001984094.164591.7772
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070192927canis_lupus_dingoENSCAFP0002003228766.513861.9266
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701960.654.6callorhinchus_miliiENSCMIP0000002539579.319471.466
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.471.4chrysemys_picta_belliiENSCPBP0000003769196.325593.7008
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.471.2crocodylus_porosusENSCPRP0000501208490.841688.1188
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197370.6sphenodon_punctatusENSSPUP0000001903993.112290.051
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701972.269.2laticauda_laticaudataENSLLTP0000000537494.255990.3394
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701972.269.2notechis_scutatusENSNSUP0000002250794.255990.3394
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701972.469.4pseudonaja_textilisENSPTXP0000001941994.51790.6005
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.271.2anas_platyrhynchos_platyrhynchosENSAPLP0000002995395.064992.4675
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.271.2gallus_gallusENSGALP0001002212795.064992.4675
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.271.2meleagris_gallopavoENSMGAP0000000331695.064992.4675
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701972.870.8serinus_canariaENSSCAP0000000435594.545591.9481
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701972.870.8parus_majorENSPMJP0000000036494.545591.9481
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.471.4pelodiscus_sinensisENSPSIP0000001256095.077792.487
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701972.869.8anolis_carolinensisENSACAP0000000942194.545590.6494
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.271.2struthio_camelus_australisENSSCUP0000002238692.658290.1266
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701970.867.6naja_najaENSNNAP0000002783493.403789.1821
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701972.870.8ficedula_albicollisENSFALP0000000392294.545591.9481
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701966.461.8leptobrachium_leishanenseENSLLEP0000002057486.010480.0518
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.270.4podarcis_muralisENSPMRP0000003485085.915582.6291
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.471.4terrapene_carolina_triunguisENSTMTP0000003245696.325593.7008
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.271.2aquila_chrysaetos_chrysaetosENSACCP0002002421595.064992.4675
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.271.2coturnix_japonicaENSCJPP0000502031195.064992.4675
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701972.870.8geospiza_fortisENSGFOP0000001775594.545591.9481
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701972.870.8taeniopygia_guttataENSTGUP0000000220294.545591.9481
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.471.4chelonoidis_abingdoniiENSCABP0000001334696.325593.7008
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.271.2anser_brachyrhynchusENSABRP0000001358886.320883.9623
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.671.2salvator_merianaeENSSMRP0000001133695.584492.4675
ENSOGAG00000007839otolemur_garnettiiENSOGAP0000000701973.471.4gopherus_evgoodeiENSGEVP0000502381496.325593.7008
ENSOGAG00000007839otolemur_garnettiiENSOGAP000000070197370.8strigops_habroptilaENSSHBP0000502488190.79688.0597

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression