RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSODEG00000006804	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	724 bases	Strand	Minus strand
Position	JH651566.1 : 10413422 - 10414145	RNA binding domain	KH_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSODEP00000009109	KH_2	PF07650	2e-11	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSODET00000009245	486	161aa	ENSODEP00000009109

Gene Model

Click here to download ENSODEG00000006804's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSODEG00000006804's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSODEG00000006804	octodon_degus	ENSODEP00000002300	57.1429	52.5974	octodon_degus	ENSODEP00000009109	54.6584	50.3106
ENSODEG00000006804	octodon_degus	ENSODEP00000001653	62.3318	59.1928	octodon_degus	ENSODEP00000009109	86.3354	81.9876
ENSODEG00000006804	octodon_degus	ENSODEP00000004932	74.1667	67.5	octodon_degus	ENSODEP00000009109	55.2795	50.3106
ENSODEG00000006804	octodon_degus	ENSODEP00000003298	66.5198	65.1982	octodon_degus	ENSODEP00000009109	93.7888	91.9255
ENSODEG00000006804	octodon_degus	ENSODEP00000000781	65.3509	64.0351	octodon_degus	ENSODEP00000009109	92.5466	90.6832
ENSODEG00000006804	octodon_degus	ENSODEP00000006079	65.7025	64.876	octodon_degus	ENSODEP00000009109	98.7578	97.5155
ENSODEG00000006804	octodon_degus	ENSODEP00000006328	91.3043	86.9565	octodon_degus	ENSODEP00000009109	52.1739	49.6894
ENSODEG00000006804	octodon_degus	ENSODEP00000016296	31.0345	20.1149	octodon_degus	ENSODEP00000009109	33.5404	21.7391
ENSODEG00000006804	octodon_degus	ENSODEP00000017786	83.8983	76.2712	octodon_degus	ENSODEP00000009109	61.4907	55.9006

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	97.5155	96.2733	notamacropus_eugenii	ENSMEUP00000010558	64.6091	63.786
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	85.7143	81.9876	choloepus_hoffmanni	ENSCHOP00000004720	63.0137	60.274
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	dasypus_novemcinctus	ENSDNOP00000011538	60.1504	59.3985
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	96.8944	95.0311	erinaceus_europaeus	ENSEEUP00000013268	64.1975	62.963
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	76.3975	75.1553	echinops_telfairi	ENSETEP00000012566	50.6173	49.7942
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	callithrix_jacchus	ENSCJAP00000028461	56.7376	55.6738
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	cercocebus_atys	ENSCATP00000023620	59.7015	58.5821
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	29.1925	28.5714	macaca_fascicularis	ENSMFAP00000039612	61.039	59.7403
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	macaca_mulatta	ENSMMUP00000036826	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	79.5031	76.3975	macaca_nemestrina	ENSMNEP00000040701	78.0488	75
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	69.5652	65.8385	macaca_nemestrina	ENSMNEP00000013168	49.7778	47.1111
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	mandrillus_leucophaeus	ENSMLEP00000006717	61.7761	60.6178
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	gorilla_gorilla	ENSGGOP00000006379	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	pan_paniscus	ENSPPAP00000012063	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	pan_troglodytes	ENSPTRP00000062955	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	homo_sapiens	ENSP00000434643	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	canis_lupus_familiaris	ENSCAFP00845016559	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	vulpes_vulpes	ENSVVUP00000033702	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	mustela_putorius_furo	ENSMPUP00000009120	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	felis_catus	ENSFCAP00000011080	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	panthera_pardus	ENSPPRP00000028833	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	tursiops_truncatus	ENSTTRP00000005538	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	physeter_catodon	ENSPCTP00005017935	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	delphinapterus_leucas	ENSDLEP00000003876	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	loxodonta_africana	ENSLAFP00000003582	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	equus_asinus	ENSEASP00005020725	56.9395	56.2278
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	equus_caballus	ENSECAP00000011789	56.9395	56.2278
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	72.0497	71.4286	procavia_capensis	ENSPCAP00000002830	47.7366	47.3251
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	bos_taurus	ENSBTAP00000003962	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	capra_hircus	ENSCHIP00000009520	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	98.7578	97.5155	ochotona_princeps	ENSOPRP00000008678	65.4321	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	marmota_marmota_marmota	ENSMMMP00000011026	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	98.7578	97.5155	urocitellus_parryii	ENSUPAP00010016925	65.4321	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	dipodomys_ordii	ENSDORP00000002794	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	mus_caroli	MGP_CAROLIEiJ_P0080837	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	mus_musculus	ENSMUSP00000032998	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	mesocricetus_auratus	ENSMAUP00000011447	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	mus_spretus	MGP_SPRETEiJ_P0084207	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	mus_pahari	MGP_PahariEiJ_P0017676	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	96.2733	94.4099	rattus_norvegicus	ENSRNOP00000009988	63.786	62.5514
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	mus_spicilegus	ENSMSIP00000032663	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	vicugna_pacos	ENSVPAP00000010808	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	91.9255	90.6832	sorex_araneus	ENSSARP00000006343	61.4108	60.5809
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	cavia_porcellus	ENSCPOP00000028766	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	84.472	78.882	phascolarctos_cinereus	ENSPCIP00000025254	80	74.7059
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	97.5155	96.2733	phascolarctos_cinereus	ENSPCIP00000032530	64.6091	63.786
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	28.5714	27.3292	phascolarctos_cinereus	ENSPCIP00000051280	54.7619	52.381
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	88.8199	84.472	phascolarctos_cinereus	ENSPCIP00000030287	94.702	90.0662
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	tupaia_belangeri	ENSTBEP00000006091	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	bos_grunniens	ENSBGRP00000037211	56.9395	55.8719
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	saimiri_boliviensis_boliviensis	ENSSBOP00000010077	61.7761	60.6178
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	catagonus_wagneri	ENSCWAP00000002419	61.0687	59.9237
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	98.7578	97.5155	monodelphis_domestica	ENSMODP00000008611	65.4321	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	sciurus_vulgaris	ENSSVLP00005020573	99.3789	98.1366
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	peromyscus_maniculatus_bairdii	ENSPEMP00000025262	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	jaculus_jaculus	ENSJJAP00000017418	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	bos_mutus	ENSBMUP00000004815	62.0155	60.8527
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	90.0621	84.472	vombatus_ursinus	ENSVURP00010007928	90.0621	84.472
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	88.8199	85.7143	vombatus_ursinus	ENSVURP00010003617	95.9732	92.6174
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	97.5155	96.2733	vombatus_ursinus	ENSVURP00010022232	64.6091	63.786
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	canis_lupus_dingo	ENSCAFP00020002483	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	91.9255	90.0621	prolemur_simus	ENSPSMP00000026649	98.0132	96.0265
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	prolemur_simus	ENSPSMP00000003736	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	moschus_moschiferus	ENSMMSP00000013766	62.0155	60.8527
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	rhinolophus_ferrumequinum	ENSRFEP00010027399	56.9395	56.2278
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	rhinopithecus_bieti	ENSRBIP00000043513	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	chinchilla_lanigera	ENSCLAP00000020172	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	cebus_imitator	ENSCCAP00000008838	59.2593	58.1481
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	bos_indicus_hybrid	ENSBIXP00005045434	56.9395	55.8719
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	propithecus_coquereli	ENSPCOP00000031940	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	93.7888	90.0621	carlito_syrichta	ENSTSYP00000018615	55.9259	53.7037
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	90.6832	90.0621	pteropus_vampyrus	ENSPVAP00000010626	60.3306	59.9174
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	otolemur_garnettii	ENSOGAP00000004758	65.5738	64.3443
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	monodon_monoceros	ENSMMNP00015027057	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	neovison_vison	ENSNVIP00000029223	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	rhinopithecus_roxellana	ENSRROP00000002484	65.8436	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	98.1366	panthera_tigris_altaica	ENSPTIP00000012853	65.8436	65.0206
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	98.7578	97.5155	myotis_lucifugus	ENSMLUP00000003714	65.4321	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	98.7578	97.5155	heterocephalus_glaber_female	ENSHGLP00000027191	65.4321	64.6091
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	80.1242	77.6398	aotus_nancymaae	ENSANAP00000010942	57.3333	55.5556
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	99.3789	97.5155	bison_bison_bison	ENSBBBP00000026767	62.0155	60.8527
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	81.9876	68.323	caenorhabditis_elegans	C23G10.3.1	53.4413	44.5344
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	83.2298	72.0497	drosophila_melanogaster	FBpp0312066	54.4715	47.1545
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	84.472	79.5031	ciona_intestinalis	ENSCINP00000010313	51.711	48.6692
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	68.323	61.4907	petromyzon_marinus	ENSPMAP00000008596	55	49.5
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	87.5776	78.2609	eptatretus_burgeri	ENSEBUP00000005415	77.9006	69.6133
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	96.8944	95.0311	callorhinchus_milii	ENSCMIP00000043843	62.4	61.2
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	96.8944	91.9255	fundulus_heteroclitus	ENSFHEP00000034432	63.6735	60.4082
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	96.8944	95.0311	notechis_scutatus	ENSNSUP00000023821	64.1975	62.963
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	96.8944	95.0311	pseudonaja_textilis	ENSPTXP00000021463	64.1975	62.963
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	84.472	78.2609	ciona_savignyi	ENSCSAVP00000005843	52.9183	49.0272
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	72.0497	60.8696	saccharomyces_cerevisiae	YNL178W	48.3333	40.8333
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	79.5031	75.1553	naja_naja	ENSNNAP00000012024	51.2	48.4
ENSODEG00000006804	octodon_degus	ENSODEP00000009109	96.2733	93.1677	nothobranchius_furzeri	ENSNFUP00015032038	61.5079	59.5238

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression