Description

Ensembl ID ENSODEG00000006001 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 13877 bases Strand Plus strand
Position JH651631.1 : 4119820 - 4133696 RNA binding domain Ribosomal_L30
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSODEP00000008056 Ribosomal_L30 PF00327 1.9e-14 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSODET00000008179 486 161aa ENSODEP00000008056

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSODEG00000006001octodon_degusENSODEP0000001346493.167790.6832octodon_degusENSODEP0000000805693.167790.6832
ENSODEG00000006001octodon_degusENSODEP0000002585783.798982.1229octodon_degusENSODEP0000000805693.167791.3043
ENSODEG00000006001octodon_degusENSODEP0000002543480.446977.095octodon_degusENSODEP0000000805689.44185.7143

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSODEG00000006001octodon_degusENSODEP0000000805687.577680.1242sarcophilus_harrisiiENSSHAP0000003303387.577680.1242
ENSODEG00000006001octodon_degusENSODEP0000000805686.335476.3975choloepus_hoffmanniENSCHOP0000000513685.276175.4601
ENSODEG00000006001octodon_degusENSODEP0000000805685.714375.7764dasypus_novemcinctusENSDNOP0000003002485.714375.7764
ENSODEG00000006001octodon_degusENSODEP0000000805683.850972.0497dasypus_novemcinctusENSDNOP0000001785284.37572.5
ENSODEG00000006001octodon_degusENSODEP0000000805686.335477.6398dasypus_novemcinctusENSDNOP0000001447586.335477.6398
ENSODEG00000006001octodon_degusENSODEP0000000805683.229873.2919dasypus_novemcinctusENSDNOP0000002571585.897475.641
ENSODEG00000006001octodon_degusENSODEP0000000805688.819981.3665echinops_telfairiENSETEP0000000407684.117677.0588
ENSODEG00000006001octodon_degusENSODEP0000000805690.683285.0932callithrix_jacchusENSCJAP0000001314873.737469.1919
ENSODEG00000006001octodon_degusENSODEP0000000805691.304385.7143cercocebus_atysENSCATP0000003656191.304385.7143
ENSODEG00000006001octodon_degusENSODEP0000000805691.304385.0932macaca_fascicularisENSMFAP0000000402091.304385.0932
ENSODEG00000006001octodon_degusENSODEP0000000805690.683285.0932macaca_mulattaENSMMUP0000007081090.683285.0932
ENSODEG00000006001octodon_degusENSODEP0000000805676.397571.4286macaca_nemestrinaENSMNEP0000002068891.79185.8209
ENSODEG00000006001octodon_degusENSODEP0000000805691.304385.7143papio_anubisENSPANP0000004181591.304385.7143
ENSODEG00000006001octodon_degusENSODEP0000000805691.304385.7143mandrillus_leucophaeusENSMLEP0000000744291.304385.7143
ENSODEG00000006001octodon_degusENSODEP0000000805690.062183.8509gorilla_gorillaENSGGOP0000003565890.062183.8509
ENSODEG00000006001octodon_degusENSODEP0000000805690.683283.8509pan_paniscusENSPPAP0000003206490.683283.8509
ENSODEG00000006001octodon_degusENSODEP0000000805690.683284.472pongo_abeliiENSPPYP0000004299890.683284.472
ENSODEG00000006001octodon_degusENSODEP0000000805690.683283.8509pan_troglodytesENSPTRP0000002103490.683283.8509
ENSODEG00000006001octodon_degusENSODEP0000000805690.062183.8509homo_sapiensENSP0000033805790.062183.8509
ENSODEG00000006001octodon_degusENSODEP0000000805690.683283.8509canis_lupus_familiarisENSCAFP0084502483790.683283.8509
ENSODEG00000006001octodon_degusENSODEP0000000805690.062183.2298ursus_americanusENSUAMP0000001967390.062183.2298
ENSODEG00000006001octodon_degusENSODEP0000000805690.683283.2298ailuropoda_melanoleucaENSAMEP0000002647482.485975.7062
ENSODEG00000006001octodon_degusENSODEP0000000805688.198881.3665mustela_putorius_furoENSMPUP0000001099588.7581.875
ENSODEG00000006001octodon_degusENSODEP0000000805690.062183.8509felis_catusENSFCAP0000001651157.539753.5714
ENSODEG00000006001octodon_degusENSODEP0000000805661.490752.1739felis_catusENSFCAP000000585695546.6667
ENSODEG00000006001octodon_degusENSODEP0000000805689.44183.2298panthera_leoENSPLOP0000001845568.246463.5071
ENSODEG00000006001octodon_degusENSODEP0000000805689.44183.2298panthera_pardusENSPPRP0000001669289.44183.2298
ENSODEG00000006001octodon_degusENSODEP0000000805688.198881.9876tursiops_truncatusENSTTRP0000000464781.609275.8621
ENSODEG00000006001octodon_degusENSODEP0000000805683.850976.3975physeter_catodonENSPCTP0000501361483.850976.3975
ENSODEG00000006001octodon_degusENSODEP0000000805670.186359.6273delphinapterus_leucasENSDLEP0000001596872.435961.5385
ENSODEG00000006001octodon_degusENSODEP0000000805686.335477.6398delphinapterus_leucasENSDLEP0000002830586.335477.6398
ENSODEG00000006001octodon_degusENSODEP0000000805688.198881.9876delphinapterus_leucasENSDLEP0000000164588.198881.9876
ENSODEG00000006001octodon_degusENSODEP0000000805688.198882.6087balaenoptera_musculusENSBMSP0001001903988.198882.6087
ENSODEG00000006001octodon_degusENSODEP0000000805688.819981.3665loxodonta_africanaENSLAFP0000000683578.142171.5847
ENSODEG00000006001octodon_degusENSODEP0000000805688.819979.5031equus_asinusENSEASP0000503199788.819979.5031
ENSODEG00000006001octodon_degusENSODEP0000000805689.44180.1242equus_caballusENSECAP0000008188756.031150.1946
ENSODEG00000006001octodon_degusENSODEP0000000805691.304384.472sus_scrofaENSSSCP0000006854891.304384.472
ENSODEG00000006001octodon_degusENSODEP0000000805689.44183.8509camelus_dromedariusENSCDRP0000502603289.44183.8509
ENSODEG00000006001octodon_degusENSODEP0000000805689.44179.5031bos_taurusENSBTAP0000000518389.44179.5031
ENSODEG00000006001octodon_degusENSODEP0000000805654.658444.7205bos_taurusENSBTAP0000007010449.16240.2235
ENSODEG00000006001octodon_degusENSODEP0000000805690.062180.7453capra_hircusENSCHIP0000002874690.062180.7453
ENSODEG00000006001octodon_degusENSODEP0000000805688.819980.1242ovis_aries_rambouilletENSOARP0002001776788.819980.1242
ENSODEG00000006001octodon_degusENSODEP0000000805689.44181.3665ovis_aries_rambouilletENSOARP0002001614289.44181.3665
ENSODEG00000006001octodon_degusENSODEP0000000805687.577678.882ochotona_princepsENSOPRP0000000671384.431176.0479
ENSODEG00000006001octodon_degusENSODEP0000000805689.44186.3354marmota_marmota_marmotaENSMMMP0000002258092.903289.6774
ENSODEG00000006001octodon_degusENSODEP0000000805690.683285.0932oryctolagus_cuniculusENSOCUP0000000355690.683285.0932
ENSODEG00000006001octodon_degusENSODEP0000000805689.44185.7143urocitellus_parryiiENSUPAP0001000611792.903289.0323
ENSODEG00000006001octodon_degusENSODEP0000000805686.335477.0186dipodomys_ordiiENSDORP0000001008785.802576.5432
ENSODEG00000006001octodon_degusENSODEP0000000805688.198881.3665cricetulus_griseus_chok1gshdENSCGRP0000100475488.7581.875
ENSODEG00000006001octodon_degusENSODEP0000000805688.198880.1242mus_caroliMGP_CAROLIEiJ_P001723888.7580.625
ENSODEG00000006001octodon_degusENSODEP0000000805686.956578.882mus_musculusENSMUSP0000002725687.579.375
ENSODEG00000006001octodon_degusENSODEP0000000805668.944160.2484mesocricetus_auratusENSMAUP0000001531377.622467.8322
ENSODEG00000006001octodon_degusENSODEP0000000805685.714380.1242mesocricetus_auratusENSMAUP0000002449183.132577.7108
ENSODEG00000006001octodon_degusENSODEP0000000805688.198881.3665mesocricetus_auratusENSMAUP0000001933482.558176.1628
ENSODEG00000006001octodon_degusENSODEP0000000805687.577679.5031mus_spretusMGP_SPRETEiJ_P001824088.12580
ENSODEG00000006001octodon_degusENSODEP0000000805688.198880.1242mus_pahariMGP_PahariEiJ_P007258688.7580.625
ENSODEG00000006001octodon_degusENSODEP0000000805673.91361.4907rattus_norvegicusENSRNOP0000007908074.842862.2642
ENSODEG00000006001octodon_degusENSODEP0000000805688.198879.5031rattus_norvegicusENSRNOP0000008324676.344168.8172
ENSODEG00000006001octodon_degusENSODEP0000000805685.714377.0186mus_spicilegusENSMSIP0000001265786.2577.5
ENSODEG00000006001octodon_degusENSODEP0000000805681.366568.323mus_spicilegusENSMSIP0000002122281.87568.75
ENSODEG00000006001octodon_degusENSODEP0000000805686.956578.882mus_spicilegusENSMSIP0000000733287.579.375
ENSODEG00000006001octodon_degusENSODEP0000000805681.987671.4286mus_spicilegusENSMSIP0000000425484.615473.7179
ENSODEG00000006001octodon_degusENSODEP0000000805648.447245.3416sorex_araneusENSSARP0000000078057.352953.6765
ENSODEG00000006001octodon_degusENSODEP0000000805680.124272.6708microcebus_murinusENSMICP0000001655484.313776.4706
ENSODEG00000006001octodon_degusENSODEP0000000805690.683283.2298microcebus_murinusENSMICP0000001057590.683283.2298
ENSODEG00000006001octodon_degusENSODEP0000000805673.291966.4596microcebus_murinusENSMICP0000002046787.407479.2593
ENSODEG00000006001octodon_degusENSODEP0000000805686.956584.472cavia_porcellusENSCPOP0000000961990.322687.7419
ENSODEG00000006001octodon_degusENSODEP0000000805688.819981.3665ursus_maritimusENSUMAP0000001192578.571471.978
ENSODEG00000006001octodon_degusENSODEP0000000805685.093277.6398phascolarctos_cinereusENSPCIP0000004743285.093277.6398
ENSODEG00000006001octodon_degusENSODEP0000000805661.490756.5217tupaia_belangeriENSTBEP0000000666557.894753.2164
ENSODEG00000006001octodon_degusENSODEP0000000805656.521745.9627bos_grunniensENSBGRP0000002741451.412441.8079
ENSODEG00000006001octodon_degusENSODEP0000000805688.819979.5031bos_grunniensENSBGRP0000004293988.819979.5031
ENSODEG00000006001octodon_degusENSODEP0000000805690.062184.472saimiri_boliviensis_boliviensisENSSBOP0000004068990.062184.472
ENSODEG00000006001octodon_degusENSODEP0000000805646.583941.6149saimiri_boliviensis_boliviensisENSSBOP0000001059586.206977.0115
ENSODEG00000006001octodon_degusENSODEP0000000805692.546686.9565catagonus_wagneriENSCWAP0000000129092.546686.9565
ENSODEG00000006001octodon_degusENSODEP0000000805688.819983.2298sciurus_vulgarisENSSVLP0000501436588.819983.2298
ENSODEG00000006001octodon_degusENSODEP0000000805688.819983.2298sciurus_vulgarisENSSVLP0000501867588.819983.2298
ENSODEG00000006001octodon_degusENSODEP0000000805670.186359.6273phocoena_sinusENSPSNP0000001958672.435961.5385
ENSODEG00000006001octodon_degusENSODEP0000000805683.850974.5342phocoena_sinusENSPSNP0000002735283.850974.5342
ENSODEG00000006001octodon_degusENSODEP0000000805688.198881.9876phocoena_sinusENSPSNP0000000993788.198881.9876
ENSODEG00000006001octodon_degusENSODEP0000000805688.819983.8509peromyscus_maniculatus_bairdiiENSPEMP0000002032689.37584.375
ENSODEG00000006001octodon_degusENSODEP0000000805685.714377.0186peromyscus_maniculatus_bairdiiENSPEMP0000000525586.2577.5
ENSODEG00000006001octodon_degusENSODEP0000000805688.819982.6087jaculus_jaculusENSJJAP0000000323288.819982.6087
ENSODEG00000006001octodon_degusENSODEP0000000805688.819979.5031bos_mutusENSBMUP0000000190488.819979.5031
ENSODEG00000006001octodon_degusENSODEP0000000805688.198881.3665nannospalax_galiliENSNGAP0000002101488.7581.875
ENSODEG00000006001octodon_degusENSODEP0000000805685.093276.3975vombatus_ursinusENSVURP0001000029385.093276.3975
ENSODEG00000006001octodon_degusENSODEP0000000805690.062183.2298canis_lupus_dingoENSCAFP0002003205090.062183.2298
ENSODEG00000006001octodon_degusENSODEP0000000805690.062183.2298prolemur_simusENSPSMP0000002778390.062183.2298
ENSODEG00000006001octodon_degusENSODEP0000000805688.819980.1242moschus_moschiferusENSMMSP0000000263188.819980.1242
ENSODEG00000006001octodon_degusENSODEP0000000805690.062183.2298rhinolophus_ferrumequinumENSRFEP0001003345186.309579.7619
ENSODEG00000006001octodon_degusENSODEP0000000805682.608776.3975rhinopithecus_bietiENSRBIP0000003625285.806479.3548
ENSODEG00000006001octodon_degusENSODEP0000000805691.304387.5776chinchilla_lanigeraENSCLAP0000000810982.122978.771
ENSODEG00000006001octodon_degusENSODEP0000000805690.683285.0932chlorocebus_sabaeusENSCSAP0000001325590.683285.0932
ENSODEG00000006001octodon_degusENSODEP0000000805684.47278.2609cebus_imitatorENSCCAP0000000303485.534679.2453
ENSODEG00000006001octodon_degusENSODEP0000000805688.819982.6087cebus_imitatorENSCCAP0000003287189.37583.125
ENSODEG00000006001octodon_degusENSODEP0000000805689.44179.5031bos_indicus_hybridENSBIXP0000500873859.75153.112
ENSODEG00000006001octodon_degusENSODEP0000000805690.062184.472propithecus_coquereliENSPCOP0000000523890.062184.472
ENSODEG00000006001octodon_degusENSODEP0000000805685.714378.882propithecus_coquereliENSPCOP0000000035185.714378.882
ENSODEG00000006001octodon_degusENSODEP0000000805676.397567.0807carlito_syrichtaENSTSYP0000002376883.108172.973
ENSODEG00000006001octodon_degusENSODEP0000000805689.44180.7453carlito_syrichtaENSTSYP0000003145189.44180.7453
ENSODEG00000006001octodon_degusENSODEP0000000805689.44182.6087pteropus_vampyrusENSPVAP0000000621984.210577.7778
ENSODEG00000006001octodon_degusENSODEP0000000805688.819982.6087otolemur_garnettiiENSOGAP0000000200085.628779.6407
ENSODEG00000006001octodon_degusENSODEP0000000805684.47275.7764otolemur_garnettiiENSOGAP0000001633684.47275.7764
ENSODEG00000006001octodon_degusENSODEP0000000805681.987673.913otolemur_garnettiiENSOGAP0000001931083.544375.3165
ENSODEG00000006001octodon_degusENSODEP0000000805685.714377.0186monodon_monocerosENSMMNP0001502978485.714377.0186
ENSODEG00000006001octodon_degusENSODEP0000000805688.198881.9876monodon_monocerosENSMMNP0001502121788.198881.9876
ENSODEG00000006001octodon_degusENSODEP0000000805687.577680.7453neovison_visonENSNVIP0000003020188.12581.25
ENSODEG00000006001octodon_degusENSODEP0000000805690.683285.0932rhinopithecus_roxellanaENSRROP0000004324790.683285.0932
ENSODEG00000006001octodon_degusENSODEP0000000805689.44183.2298panthera_tigris_altaicaENSPTIP0000000200389.44183.2298
ENSODEG00000006001octodon_degusENSODEP0000000805690.062183.8509myotis_lucifugusENSMLUP0000002126190.062183.8509
ENSODEG00000006001octodon_degusENSODEP0000000805687.577680.7453microtus_ochrogasterENSMOCP0000000604988.12581.25
ENSODEG00000006001octodon_degusENSODEP0000000805690.683283.2298aotus_nancymaaeENSANAP0000002095690.683283.2298
ENSODEG00000006001octodon_degusENSODEP0000000805691.304385.0932nomascus_leucogenysENSNLEP0000004246291.304385.0932
ENSODEG00000006001octodon_degusENSODEP0000000805671.428662.1118nomascus_leucogenysENSNLEP0000002597280.419669.9301
ENSODEG00000006001octodon_degusENSODEP0000000805690.062181.3665cervus_hanglu_yarkandensisENSCHYP0000001517190.062181.3665
ENSODEG00000006001octodon_degusENSODEP0000000805657.76445.9627bison_bison_bisonENSBBBP0000002648150.270340
ENSODEG00000006001octodon_degusENSODEP0000000805688.819978.882bison_bison_bisonENSBBBP0000001549188.819978.882
ENSODEG00000006001octodon_degusENSODEP0000000805663.35447.8261gadus_morhuaENSGMOP0000001345064.55748.7342
ENSODEG00000006001octodon_degusENSODEP0000000805659.627347.8261sphenodon_punctatusENSSPUP0000000083954.545543.75
ENSODEG00000006001octodon_degusENSODEP0000000805666.459649.0683hucho_huchoENSHHUP0000004709060.45244.6328
ENSODEG00000006001octodon_degusENSODEP0000000805669.565259.0062gopherus_evgoodeiENSGEVP0000500014077.241465.5172
ENSODEG00000006001octodon_degusENSODEP0000000805657.142938.5093coturnix_japonicaENSCJPP0000500010357.861638.9937

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression