RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSODEG00000004564 | Gene ID |
101592035 |
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
ribosomal protein S3 |
Status |
Confidence |
Length |
6261 bases |
Strand |
Minus strand |
Position |
JH651564.1 : 1656661 - 1662921 |
RNA binding domain |
KH_2 , Ribosomal_S3_C |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSODEP00000006079 |
KH_2 |
PF07650 |
4.5e-11 |
1 |
ENSODEP00000006079 |
Ribosomal_S3_C |
PF00189 |
1.2e-23 |
2 |
ENSODEP00000006080 |
KH_2 |
PF07650 |
1.3e-10 |
1 |
ENSODEP00000006080 |
Ribosomal_S3_C |
PF00189 |
1.3e-23 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSODET00000006178 |
729 |
242aa |
ENSODEP00000006079 |
- |
ENSODET00000006179 |
699 |
232aa |
ENSODEP00000006080 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSODEG00000004564 | octodon_degus | ENSODEP00000003298 | 95.1542 | 94.2731 | octodon_degus | ENSODEP00000006079 | 89.2562 | 88.4297 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000002300 | 89.6104 | 83.7662 | octodon_degus | ENSODEP00000006079 | 57.0248 | 53.3058 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000000781 | 94.7368 | 93.4211 | octodon_degus | ENSODEP00000006079 | 89.2562 | 88.0165 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000001653 | 87.4439 | 82.5112 | octodon_degus | ENSODEP00000006079 | 80.5785 | 76.0331 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000004932 | 88.3333 | 83.3333 | octodon_degus | ENSODEP00000006079 | 43.8017 | 41.3223 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000009109 | 98.7578 | 97.5155 | octodon_degus | ENSODEP00000006079 | 65.7025 | 64.876 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006328 | 95.6522 | 90.2174 | octodon_degus | ENSODEP00000006079 | 36.3636 | 34.2975 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000016296 | 39.0805 | 25.2874 | octodon_degus | ENSODEP00000006079 | 28.0992 | 18.1818 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000017786 | 83.8983 | 77.9661 | octodon_degus | ENSODEP00000006079 | 40.9091 | 38.0165 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 98.7603 | 98.7603 | notamacropus_eugenii | ENSMEUP00000010558 | 98.3539 | 98.3539 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 84.2975 | 80.9917 | choloepus_hoffmanni | ENSCHOP00000004720 | 93.1507 | 89.4977 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 100 | dasypus_novemcinctus | ENSDNOP00000011538 | 90.9774 | 90.9774 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 29.7521 | 29.7521 | macaca_fascicularis | ENSMFAP00000039612 | 93.5065 | 93.5065 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 99.5868 | macaca_mulatta | ENSMMUP00000036826 | 99.5885 | 99.177 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 63.6364 | 61.9835 | macaca_nemestrina | ENSMNEP00000040701 | 93.9024 | 91.4634 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 78.5124 | 76.0331 | macaca_nemestrina | ENSMNEP00000013168 | 84.4444 | 81.7778 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 99.5868 | papio_anubis | ENSPANP00000000733 | 93.4363 | 93.0502 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 97.9339 | 96.6942 | pongo_abelii | ENSPPYP00000004215 | 90.458 | 89.313 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 100 | ursus_americanus | ENSUAMP00000027871 | 99.5885 | 99.5885 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 100 | panthera_leo | ENSPLOP00000008668 | 99.5885 | 99.5885 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 99.5868 | balaenoptera_musculus | ENSBMSP00010009113 | 99.5885 | 99.177 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 100 | equus_asinus | ENSEASP00005020725 | 86.121 | 86.121 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 99.5868 | sus_scrofa | ENSSSCP00000015774 | 92.3664 | 91.9847 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 99.5868 | ovis_aries_rambouillet | ENSOARP00020006090 | 93.0769 | 92.6923 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 100 | marmota_marmota_marmota | ENSMMMP00000011026 | 99.5885 | 99.5885 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 100 | oryctolagus_cuniculus | ENSOCUP00000018598 | 86.121 | 86.121 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 77.2727 | 74.3802 | cricetulus_griseus_chok1gshd | ENSCGRP00001003156 | 90.7767 | 87.3786 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 100 | cricetulus_griseus_chok1gshd | ENSCGRP00001012207 | 86.121 | 86.121 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 100 | mus_spicilegus | ENSMSIP00000032663 | 99.5885 | 99.5885 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 95.0413 | 95.0413 | sorex_araneus | ENSSARP00000006343 | 95.4357 | 95.4357 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 99.5868 | microcebus_murinus | ENSMICP00000020936 | 99.5885 | 99.177 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 56.1983 | 53.719 | phascolarctos_cinereus | ENSPCIP00000025254 | 80 | 76.4706 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 98.7603 | 98.7603 | phascolarctos_cinereus | ENSPCIP00000032530 | 98.3539 | 98.3539 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 30.9917 | 28.9256 | phascolarctos_cinereus | ENSPCIP00000051280 | 89.2857 | 83.3333 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 59.9174 | 57.438 | phascolarctos_cinereus | ENSPCIP00000030287 | 96.0265 | 92.053 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 99.5868 | 99.5868 | monodelphis_domestica | ENSMODP00000008611 | 99.177 | 99.177 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 99.5868 | phocoena_sinus | ENSPSNP00000008404 | 99.5885 | 99.177 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 100 | nannospalax_galili | ENSNGAP00000014114 | 99.5885 | 99.5885 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 59.9174 | 57.0248 | vombatus_ursinus | ENSVURP00010007928 | 90.0621 | 85.7143 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 59.0909 | 57.438 | vombatus_ursinus | ENSVURP00010003617 | 95.9732 | 93.2886 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 98.7603 | 98.7603 | vombatus_ursinus | ENSVURP00010022232 | 98.3539 | 98.3539 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 99.5868 | chlorocebus_sabaeus | ENSCSAP00000000282 | 99.5885 | 99.177 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 99.5868 | carlito_syrichta | ENSTSYP00000007931 | 86.4286 | 86.0714 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 100 | microtus_ochrogaster | ENSMOCP00000007818 | 99.5885 | 99.5885 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 100 | 99.5868 | cervus_hanglu_yarkandensis | ENSCHYP00000007057 | 62.3711 | 62.1134 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 85.124 | 74.3802 | caenorhabditis_elegans | C23G10.3.1 | 83.4008 | 72.8745 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 87.6033 | 80.1653 | drosophila_melanogaster | FBpp0312066 | 86.1789 | 78.8618 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 88.4297 | 85.5372 | ciona_intestinalis | ENSCINP00000010313 | 81.3688 | 78.7072 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 78.5124 | 73.5537 | petromyzon_marinus | ENSPMAP00000008596 | 95 | 89 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 59.0909 | 53.3058 | eptatretus_burgeri | ENSEBUP00000005415 | 79.0055 | 71.2707 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 98.3471 | 97.9339 | callorhinchus_milii | ENSCMIP00000043843 | 95.2 | 94.8 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 98.3471 | 95.8678 | fundulus_heteroclitus | ENSFHEP00000034432 | 97.1429 | 94.6939 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 98.3471 | 97.9339 | notechis_scutatus | ENSNSUP00000023821 | 97.9424 | 97.5309 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 98.3471 | 97.9339 | pseudonaja_textilis | ENSPTXP00000021463 | 97.9424 | 97.5309 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 88.4297 | 84.7107 | ciona_savignyi | ENSCSAVP00000005843 | 83.2685 | 79.7665 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 77.686 | 65.7025 | saccharomyces_cerevisiae | YNL178W | 78.3333 | 66.25 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 86.7769 | 84.7107 | naja_naja | ENSNNAP00000012024 | 84 | 82 |
ENSODEG00000004564 | octodon_degus | ENSODEP00000006079 | 97.9339 | 96.6942 | nothobranchius_furzeri | ENSNFUP00015032038 | 94.0476 | 92.8571 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |