RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSODEG00000003742	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	516 bases	Strand	Plus strand
Position	JH651769.1 : 1109106 - 1109621	RNA binding domain	KH_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSODEP00000004932	KH_2	PF07650	9.3e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSODET00000005022	363	120aa	ENSODEP00000004932

Gene Model

Click here to download ENSODEG00000003742's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSODEG00000003742's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSODEG00000003742	octodon_degus	ENSODEP00000002300	62.987	57.1429	octodon_degus	ENSODEP00000004932	80.8333	73.3333
ENSODEG00000003742	octodon_degus	ENSODEP00000001653	43.4978	39.4619	octodon_degus	ENSODEP00000004932	80.8333	73.3333
ENSODEG00000003742	octodon_degus	ENSODEP00000009109	55.2795	50.3106	octodon_degus	ENSODEP00000004932	74.1667	67.5
ENSODEG00000003742	octodon_degus	ENSODEP00000003298	44.0529	40.9692	octodon_degus	ENSODEP00000004932	83.3333	77.5
ENSODEG00000003742	octodon_degus	ENSODEP00000000781	41.6667	38.5965	octodon_degus	ENSODEP00000004932	79.1667	73.3333
ENSODEG00000003742	octodon_degus	ENSODEP00000006079	43.8017	41.3223	octodon_degus	ENSODEP00000004932	88.3333	83.3333
ENSODEG00000003742	octodon_degus	ENSODEP00000006328	83.6957	76.087	octodon_degus	ENSODEP00000004932	64.1667	58.3333
ENSODEG00000003742	octodon_degus	ENSODEP00000016296	21.2644	12.6437	octodon_degus	ENSODEP00000004932	30.8333	18.3333
ENSODEG00000003742	octodon_degus	ENSODEP00000017786	65.2542	58.4746	octodon_degus	ENSODEP00000004932	64.1667	57.5

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	notamacropus_eugenii	ENSMEUP00000010558	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	86.6667	81.6667	choloepus_hoffmanni	ENSCHOP00000004720	47.4886	44.7489
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	dasypus_novemcinctus	ENSDNOP00000011538	40.2256	37.9699
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	85.8333	80.8333	erinaceus_europaeus	ENSEEUP00000013268	42.3868	39.9177
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	76.6667	71.6667	echinops_telfairi	ENSETEP00000012566	37.8601	35.3909
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	callithrix_jacchus	ENSCJAP00000028461	37.9433	35.8156
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	cercocebus_atys	ENSCATP00000023620	39.9254	37.6866
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	50.8333	50	macaca_fascicularis	ENSMFAP00000039612	79.2208	77.9221
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	macaca_mulatta	ENSMMUP00000036826	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	51.6667	45.8333	macaca_nemestrina	ENSMNEP00000040701	37.8049	33.5366
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	80	75	macaca_nemestrina	ENSMNEP00000013168	42.6667	40
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	mandrillus_leucophaeus	ENSMLEP00000006717	41.3127	38.9961
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	gorilla_gorilla	ENSGGOP00000006379	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	pan_paniscus	ENSPPAP00000012063	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	pan_troglodytes	ENSPTRP00000062955	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	homo_sapiens	ENSP00000434643	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	canis_lupus_familiaris	ENSCAFP00845016559	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	vulpes_vulpes	ENSVVUP00000033702	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	mustela_putorius_furo	ENSMPUP00000009120	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	felis_catus	ENSFCAP00000011080	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	panthera_pardus	ENSPPRP00000028833	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	tursiops_truncatus	ENSTTRP00000005538	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	physeter_catodon	ENSPCTP00005017935	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	delphinapterus_leucas	ENSDLEP00000003876	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	loxodonta_africana	ENSLAFP00000003582	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	equus_asinus	ENSEASP00005020725	38.0783	35.9431
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	equus_caballus	ENSECAP00000011789	38.0783	35.9431
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	55.8333	52.5	procavia_capensis	ENSPCAP00000002830	27.572	25.9259
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	bos_taurus	ENSBTAP00000003962	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	capra_hircus	ENSCHIP00000009520	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	86.6667	81.6667	ochotona_princeps	ENSOPRP00000008678	42.7984	40.3292
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	marmota_marmota_marmota	ENSMMMP00000011026	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	88.3333	83.3333	urocitellus_parryii	ENSUPAP00010016925	43.6214	41.1523
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	dipodomys_ordii	ENSDORP00000002794	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	mus_caroli	MGP_CAROLIEiJ_P0080837	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	mus_musculus	ENSMUSP00000032998	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	mesocricetus_auratus	ENSMAUP00000011447	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	mus_spretus	MGP_SPRETEiJ_P0084207	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	mus_pahari	MGP_PahariEiJ_P0017676	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	85.8333	80	rattus_norvegicus	ENSRNOP00000009988	42.3868	39.5062
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	mus_spicilegus	ENSMSIP00000032663	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	vicugna_pacos	ENSVPAP00000010808	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	sorex_araneus	ENSSARP00000006343	44.3983	41.9087
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	cavia_porcellus	ENSCPOP00000028766	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	60	52.5	phascolarctos_cinereus	ENSPCIP00000025254	42.3529	37.0588
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	phascolarctos_cinereus	ENSPCIP00000032530	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	50.8333	49.1667	phascolarctos_cinereus	ENSPCIP00000051280	72.619	70.2381
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	65.8333	58.3333	phascolarctos_cinereus	ENSPCIP00000030287	52.3179	46.3576
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	tupaia_belangeri	ENSTBEP00000006091	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	bos_grunniens	ENSBGRP00000037211	38.0783	35.9431
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	saimiri_boliviensis_boliviensis	ENSSBOP00000010077	41.3127	38.9961
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	catagonus_wagneri	ENSCWAP00000002419	40.8397	38.5496
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	monodelphis_domestica	ENSMODP00000008611	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	74.1667	69.1667	sciurus_vulgaris	ENSSVLP00005020573	55.2795	51.5528
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	peromyscus_maniculatus_bairdii	ENSPEMP00000025262	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	jaculus_jaculus	ENSJJAP00000017418	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	bos_mutus	ENSBMUP00000004815	41.4729	39.1473
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	70.8333	62.5	vombatus_ursinus	ENSVURP00010007928	52.795	46.5839
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	63.3333	60	vombatus_ursinus	ENSVURP00010003617	51.0067	48.3221
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	vombatus_ursinus	ENSVURP00010022232	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	canis_lupus_dingo	ENSCAFP00020002483	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	65.8333	60.8333	prolemur_simus	ENSPSMP00000026649	52.3179	48.3444
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	prolemur_simus	ENSPSMP00000003736	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	moschus_moschiferus	ENSMMSP00000013766	41.4729	39.1473
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	rhinolophus_ferrumequinum	ENSRFEP00010027399	38.0783	35.9431
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	rhinopithecus_bieti	ENSRBIP00000043513	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	chinchilla_lanigera	ENSCLAP00000020172	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	cebus_imitator	ENSCCAP00000008838	39.6296	37.4074
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	bos_indicus_hybrid	ENSBIXP00005045434	38.0783	35.9431
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	propithecus_coquereli	ENSPCOP00000031940	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	86.6667	80.8333	carlito_syrichta	ENSTSYP00000018615	38.5185	35.9259
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	78.3333	73.3333	pteropus_vampyrus	ENSPVAP00000010626	38.843	36.3636
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	otolemur_garnettii	ENSOGAP00000004758	43.8525	41.3934
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	monodon_monoceros	ENSMMNP00015027057	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	neovison_vison	ENSNVIP00000029223	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	rhinopithecus_roxellana	ENSRROP00000002484	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	panthera_tigris_altaica	ENSPTIP00000012853	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	88.3333	83.3333	myotis_lucifugus	ENSMLUP00000003714	43.6214	41.1523
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	heterocephalus_glaber_female	ENSHGLP00000027191	44.0329	41.5638
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	67.5	65	aotus_nancymaae	ENSANAP00000010942	36	34.6667
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	bison_bison_bison	ENSBBBP00000026767	41.4729	39.1473
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	82.5	67.5	caenorhabditis_elegans	C23G10.3.1	40.081	32.7935
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	83.3333	73.3333	drosophila_melanogaster	FBpp0312066	40.6504	35.7724
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	80.8333	72.5	ciona_intestinalis	ENSCINP00000010313	36.8821	33.0798
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	80.8333	74.1667	petromyzon_marinus	ENSPMAP00000008596	48.5	44.5
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	66.6667	52.5	eptatretus_burgeri	ENSEBUP00000005415	44.1989	34.8066
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	88.3333	83.3333	callorhinchus_milii	ENSCMIP00000043843	42.4	40
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	fundulus_heteroclitus	ENSFHEP00000034432	43.6735	41.2245
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	88.3333	83.3333	notechis_scutatus	ENSNSUP00000023821	43.6214	41.1523
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	88.3333	83.3333	pseudonaja_textilis	ENSPTXP00000021463	43.6214	41.1523
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	80	71.6667	ciona_savignyi	ENSCSAVP00000005843	37.3541	33.463
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	75.8333	60.8333	saccharomyces_cerevisiae	YNL178W	37.9167	30.4167
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	88.3333	83.3333	naja_naja	ENSNNAP00000012024	42.4	40
ENSODEG00000003742	octodon_degus	ENSODEP00000004932	89.1667	84.1667	nothobranchius_furzeri	ENSNFUP00015032038	42.4603	40.0794

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression