RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSOCUG00000039414	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4608 bases	Strand	Plus strand
Position	GL019125 : 147591 - 152198	RNA binding domain	Ribonuclease_T2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOCUP00000048180	Ribonuclease_T2	PF00445	2.8e-06	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSOCUT00000058784	1496	211aa	ENSOCUP00000048180

Gene Model

Click here to download ENSOCUG00000039414's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOCUG00000039414's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOCUG00000039414

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOCUG00000039414	oryctolagus_cuniculus	ENSOCUP00000048180	33.6493	26.0664	sphenodon_punctatus	ENSSPUP00000002789	48.6301	37.6712
ENSOCUG00000039414	oryctolagus_cuniculus	ENSOCUP00000048180	30.3318	20.8531	laticauda_laticaudata	ENSLLTP00000014136	39.2638	26.9939

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression