Description

Ensembl ID ENSOCUG00000003634 Gene ID Accession -
Symbol PCBP1 Alias - Full Name Oryctolagus cuniculus poly(rC) binding protein 1 (PCBP1), mRNA.
Status Confidence Length 1482 bases Strand Minus strand
Position 2 : 116117170 - 116118651 RNA binding domain KH_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSOCUP00000020092 KH_1 PF00013 6.7e-51 1
ENSOCUP00000020092 KH_1 PF00013 6.7e-51 2
ENSOCUP00000020092 KH_1 PF00013 6.7e-51 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
PCBP1-201 ENSOCUT00000003633 1482 356aa ENSOCUP00000020092

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000000381425.964915.0877oryctolagus_cuniculusENSOCUP0000002009241.57324.1573
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002356458.064545.1613oryctolagus_cuniculusENSOCUP0000002009265.730351.1236
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002015123.99313.6602oryctolagus_cuniculusENSOCUP0000002009238.483121.9101
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002513331.654719.4245oryctolagus_cuniculusENSOCUP0000002009237.078722.7528
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000000893230.885520.0864oryctolagus_cuniculusENSOCUP0000002009240.168526.1236
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000003033889.912383.3333oryctolagus_cuniculusENSOCUP0000002009257.584353.3708
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000004799588.524682.5137oryctolagus_cuniculusENSOCUP0000002009291.011284.8315
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000003501490.654285.3583oryctolagus_cuniculusENSOCUP0000002009281.741676.9663
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000004935986.819580.5158oryctolagus_cuniculusENSOCUP0000002009285.112478.9326
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000001655082.178270.297oryctolagus_cuniculusENSOCUP0000002009223.314619.9438
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000004372722.613813.2159oryctolagus_cuniculusENSOCUP0000002009243.258425.2809
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000000775426.375716.129oryctolagus_cuniculusENSOCUP0000002009239.044923.8764
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000004532765.274256.1358oryctolagus_cuniculusENSOCUP0000002009270.224760.3933
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000000535823.946814.1907oryctolagus_cuniculusENSOCUP0000002009230.337117.9775
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000001513226.4315.1874oryctolagus_cuniculusENSOCUP0000002009237.640421.6292
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000001709126.858516.5468oryctolagus_cuniculusENSOCUP0000002009231.460719.382
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000003600320.754713.2075oryctolagus_cuniculusENSOCUP0000002009240.168525.5618

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009280.056279.4944dasypus_novemcinctusENSDNOP0000003466499.650498.951
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009296.629294.6629callithrix_jacchusENSCJAP0000007116898.567396.5616
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100callithrix_jacchusENSCJAP00000072017100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100cercocebus_atysENSCATP00000004155100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100macaca_fascicularisENSMFAP00000063749100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100macaca_mulattaENSMMUP00000046093100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100macaca_nemestrinaENSMNEP00000000621100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009295.224795.2247papio_anubisENSPANP00000029646100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100gorilla_gorillaENSGGOP00000023163100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100mandrillus_leucophaeusENSMLEP00000006936100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009299.157398.8764pan_paniscusENSPPAP0000002598998.055697.7778
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100pan_troglodytesENSPTRP00000020647100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100pongo_abeliiENSPPYP00000013749100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100homo_sapiensENSP00000305556100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009299.719199.7191canis_lupus_familiarisENSCAFP0084503755599.719199.7191
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009291.011290.1685canis_lupus_familiarisENSCAFP0084503218597.590496.6867
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009290.449490.4494vulpes_vulpesENSVVUP0000003934898.77398.773
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009297.19197.191mustela_putorius_furoENSMPUP00000007117100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100felis_catusENSFCAP00000017172100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100ailuropoda_melanoleucaENSAMEP00000016998100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100panthera_leoENSPLOP00000016842100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100panthera_pardusENSPPRP00000028437100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100delphinapterus_leucasENSDLEP00000007261100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100balaenoptera_musculusENSBMSP00010022255100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100physeter_catodonENSPCTP00005014669100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100equus_asinusENSEASP00005056688100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100equus_caballusENSECAP00000074799100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009290.449490.4494sus_scrofaENSSSCP00000076382100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009291.292191.2921bos_taurusENSBTAP0000004938399.085499.0854
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100capra_hircusENSCHIP00000003735100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009226.685425.2809camelus_dromedariusENSCDRP0000501353987.15682.5688
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100ovis_aries_rambouilletENSOARP00020007574100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100cavia_porcellusENSCPOP00000012166100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009299.719199.7191mesocricetus_auratusENSMAUP0000000841999.719199.7191
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009297.752897.7528heterocephalus_glaber_femaleENSHGLP00000043340100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009297.19197.191otolemur_garnettiiENSOGAP00000018442100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100microcebus_murinusENSMICP00000022546100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100mus_spretusMGP_SPRETEiJ_P0077741100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009296.629295.7865bos_grunniensENSBGRP0000000813510099.1279
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100mus_musculusENSMUSP00000054863100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009296.910196.9101mus_spicilegusENSMSIP0000001758396.910196.9101
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100urocitellus_parryiiENSUPAP00010006802100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100dipodomys_ordiiENSDORP00000025060100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100cricetulus_griseus_chok1gshdENSCGRP00001014090100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100microtus_ochrogasterENSMOCP00000008163100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009257.584356.7416tupaia_belangeriENSTBEP0000001362557.746556.9014
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009210099.7191bos_mutusENSBMUP0000002771910099.7191
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100mus_caroliMGP_CAROLIEiJ_P0074795100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009299.438299.4382chinchilla_lanigeraENSCLAP0000002578399.438299.4382
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100nannospalax_galiliENSNGAP00000013270100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100nannospalax_galiliENSNGAP00000009210100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100jaculus_jaculusENSJJAP00000000871100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009299.719199.7191catagonus_wagneriENSCWAP0000000481799.719199.7191
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100ictidomys_tridecemlineatusENSSTOP00000026830100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100marmota_marmota_marmotaENSMMMP00000005448100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100bison_bison_bisonENSBBBP00000008895100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100myotis_lucifugusENSMLUP00000012890100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100panthera_tigris_altaicaENSPTIP00000004929100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100nomascus_leucogenysENSNLEP00000022598100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100rhinolophus_ferrumequinumENSRFEP00010022321100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009276.966375.5618aotus_nancymaaeENSANAP0000000296496.819895.053
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009287.359685.6742aotus_nancymaaeENSANAP0000003128695.692393.8462
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009295.224794.382aotus_nancymaaeENSANAP0000001829396.581295.7265
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009276.685475.5618aotus_nancymaaeENSANAP0000002775396.466495.053
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009273.876473.0337aotus_nancymaaeENSANAP0000000893596.691295.5882
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009279.775377.809aotus_nancymaaeENSANAP0000001854695.622993.266
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009288.202287.9213aotus_nancymaaeENSANAP0000001641294.864194.5619
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009289.606788.4831aotus_nancymaaeENSANAP0000001199794.658893.4718
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100moschus_moschiferusENSMMSP00000013586100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100mus_pahariMGP_PahariEiJ_P0050906100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100cervus_hanglu_yarkandensisENSCHYP00000018032100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100peromyscus_maniculatus_bairdiiENSPEMP00000029614100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100rattus_norvegicusENSRNOP00000092121100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009285.955182.8652octodon_degusENSODEP0000000029588.953585.7558
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009291.292191.2921bos_indicus_hybridENSBIXP0000502826999.085499.0854
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009285.674283.427saimiri_boliviensis_boliviensisENSSBOP0000003848889.442887.0968
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009294.101191.0112cebus_imitatorENSCCAP0000002281492.541489.5028
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100cebus_imitatorENSCCAP00000004600100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009299.157399.1573rhinopithecus_roxellanaENSRROP0000000239293.88393.883
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009292.134892.1348rhinopithecus_roxellanaENSRROP0000000313798.795298.7952
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009299.719199.4382carlito_syrichtaENSTSYP0000003182699.719199.4382
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100chlorocebus_sabaeusENSCSAP00000018949100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100monodon_monocerosENSMMNP00015020023100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009283.42783.1461prolemur_simusENSPSMP0000002545794.285793.9683
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100phocoena_sinusENSPSNP00000026858100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100sciurus_vulgarisENSSVLP00005020164100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009299.719199.7191neovison_visonENSNVIP0000000443199.719199.7191
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP00000020092100100propithecus_coquereliENSPCOP00000028562100100
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009254.494437.3596caenorhabditis_elegansY119D3B.17.244.907430.787
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009226.966316.2921caenorhabditis_elegansY59A8B.10d.123.021613.9089
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009235.955119.382caenorhabditis_elegansC36E6.1b.119.968810.7644
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009234.831518.2584caenorhabditis_elegansM01A10.1.121.160411.0921
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009229.775315.1685caenorhabditis_elegansM88.5c.112.41226.32318
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009235.112417.9775caenorhabditis_elegansC12D8.1b.120.458310.4746
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009264.606748.5955drosophila_melanogasterFBpp029352140.139630.192
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009235.112421.3483drosophila_melanogasterFBpp030641916.02569.74359
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009234.831520.2247drosophila_melanogasterFBpp029368019.435711.2853
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009236.23619.6629drosophila_melanogasterFBpp042830716.18578.78294
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009252.80937.6404ciona_intestinalisENSCINP0000000198452.661137.535
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009222.471911.7978ciona_intestinalisENSCINP0000002595028.16914.7887
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009238.202220.2247ciona_intestinalisENSCINP0000000872623.011812.1827
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009225.280917.1348ciona_intestinalisENSCINP0000001956928.301919.1824
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009225.842715.7303ciona_intestinalisENSCINP0000003043534.98121.2928
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009236.516920.5056astyanax_mexicanusENSAMXP0000002894341.401323.2484
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009225.561817.6966ciona_savignyiENSCSAVP0000000475543.333330
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009223.876418.2584ciona_savignyiENSCSAVP0000000721469.672153.2787
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009238.202220.7865ciona_savignyiENSCSAVP0000001881323.448312.7586
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009228.932618.8202ciona_savignyiENSCSAVP0000000737533.333321.6828
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009231.179819.382ciona_savignyiENSCSAVP0000000550520.517612.7542
ENSOCUG00000003634oryctolagus_cuniculusENSOCUP0000002009216.01128.98876ciona_savignyiENSCSAVP0000000545016.86399.46746

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression