RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSOARG00020011548	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	165 bases	Strand	Plus strand
Position	11 : 52653960 - 52654124	RNA binding domain	Ribosomal_S13_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOARP00020014480	Ribosomal_S13_N	PF08069	2e-14	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSOART00020017548	165	54aa	ENSOARP00020014480

Gene Model

Click here to download ENSOARG00020011548's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOARG00020011548's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOARG00020011548

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	68.5185	62.963	canis_lupus_familiaris	ENSCAFP00845008069	52.8571	48.5714
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	59.2593	50	panthera_leo	ENSPLOP00000015225	61.5385	51.9231
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	64.8148	57.4074	delphinapterus_leucas	ENSDLEP00000001028	51.4706	45.5882
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	62.963	50	camelus_dromedarius	ENSCDRP00005032893	68	54
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	66.6667	57.4074	mus_spicilegus	ENSMSIP00000012853	63.1579	54.386
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	66.6667	55.5556	sciurus_vulgaris	ENSSVLP00005029886	66.6667	55.5556
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	92.5926	87.037	moschus_moschiferus	ENSMMSP00000024671	86.2069	81.0345
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	62.963	53.7037	ursus_maritimus	ENSUMAP00000024084	68	58
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	72.2222	55.5556	catagonus_wagneri	ENSCWAP00000007693	60.9375	46.875
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	66.6667	62.963	urocitellus_parryii	ENSUPAP00010013236	59.0164	55.7377
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	61.1111	57.4074	cebus_imitator	ENSCCAP00000036069	70.2128	65.9574
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	62.963	55.5556	prolemur_simus	ENSPSMP00000016550	29.3103	25.8621
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	62.963	55.5556	prolemur_simus	ENSPSMP00000030832	70.8333	62.5
ENSOARG00020011548	ovis_aries_rambouillet	ENSOARP00020014480	61.1111	55.5556	canis_lupus_dingo	ENSCAFP00020006374	55.9322	50.8475

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression