RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSOARG00020002841	Gene ID	101107912	Accession	-
Symbol		Alias	-	Full Name	ELAV like RNA binding protein 4
Status	Confidence	Length	164114 bases	Strand	Plus strand
Position	1 : 26146073 - 26310186	RNA binding domain	RRM_5 , RRM_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOARP00020004146	RRM_5	PF13893	1.4e-12	1
ENSOARP00020004146	RRM_5	PF13893	1.4e-12	2
ENSOARP00020004146	RRM_1	PF00076	1.1e-65	3
ENSOARP00020004146	RRM_1	PF00076	1.1e-65	4
ENSOARP00020004146	RRM_1	PF00076	1.1e-65	5
ENSOARP00020004124	RRM_5	PF13893	1.5e-12	1
ENSOARP00020004124	RRM_5	PF13893	1.5e-12	2
ENSOARP00020004124	RRM_1	PF00076	1.1e-65	3
ENSOARP00020004124	RRM_1	PF00076	1.1e-65	4
ENSOARP00020004124	RRM_1	PF00076	1.1e-65	5
ENSOARP00020004278	RRM_5	PF13893	1.6e-12	1
ENSOARP00020004278	RRM_5	PF13893	1.6e-12	2
ENSOARP00020004278	RRM_1	PF00076	1.3e-65	3
ENSOARP00020004278	RRM_1	PF00076	1.3e-65	4
ENSOARP00020004278	RRM_1	PF00076	1.3e-65	5
ENSOARP00020004163	RRM_5	PF13893	1.7e-12	1
ENSOARP00020004163	RRM_5	PF13893	1.7e-12	2
ENSOARP00020004163	RRM_1	PF00076	1.3e-65	3
ENSOARP00020004163	RRM_1	PF00076	1.3e-65	4
ENSOARP00020004163	RRM_1	PF00076	1.3e-65	5
ENSOARP00020004304	RRM_5	PF13893	1.7e-12	1
ENSOARP00020004304	RRM_5	PF13893	1.7e-12	2
ENSOARP00020004304	RRM_1	PF00076	1.4e-65	3
ENSOARP00020004304	RRM_1	PF00076	1.4e-65	4
ENSOARP00020004304	RRM_1	PF00076	1.4e-65	5
ENSOARP00020004177	RRM_5	PF13893	2.3e-12	1
ENSOARP00020004177	RRM_5	PF13893	2.3e-12	2
ENSOARP00020004177	RRM_1	PF00076	1.7e-65	3
ENSOARP00020004177	RRM_1	PF00076	1.7e-65	4
ENSOARP00020004177	RRM_1	PF00076	1.7e-65	5
ENSOARP00020004214	RRM_5	PF13893	6.9e-09	1
ENSOARP00020004214	RRM_1	PF00076	4e-52	2
ENSOARP00020004214	RRM_1	PF00076	4e-52	3
ENSOARP00020004214	RRM_1	PF00076	4e-52	4
ENSOARP00020004194	RRM_5	PF13893	7.8e-09	1
ENSOARP00020004194	RRM_1	PF00076	4.6e-52	2
ENSOARP00020004194	RRM_1	PF00076	4.6e-52	3
ENSOARP00020004194	RRM_1	PF00076	4.6e-52	4

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSOART00020005011	1110	369aa	ENSOARP00020004124
-	ENSOART00020005041	1101	366aa	ENSOARP00020004146
-	ENSOART00020005064	1140	379aa	ENSOARP00020004163
-	ENSOART00020005082	1209	402aa	ENSOARP00020004177
-	ENSOART00020005102	1227	408aa	ENSOARP00020004194
-	ENSOART00020005132	1188	395aa	ENSOARP00020004214
-	ENSOART00020005206	1143	380aa	ENSOARP00020004278
-	ENSOART00020005235	1158	385aa	ENSOARP00020004304

Gene Model

Click here to download ENSOARG00020002841's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOARG00020002841's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020009593	73.5802	67.9012	ovis_aries_rambouillet	ENSOARP00020004194	73.0392	67.402
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020028162	24.0506	14.135	ovis_aries_rambouillet	ENSOARP00020004194	27.9412	16.4216
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020008744	78.7466	71.6621	ovis_aries_rambouillet	ENSOARP00020004194	70.8333	64.4608
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020012572	23.4767	13.6201	ovis_aries_rambouillet	ENSOARP00020004194	32.1078	18.6275
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020014508	23.9804	13.0506	ovis_aries_rambouillet	ENSOARP00020004194	36.0294	19.6078
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020018207	27.6151	17.1548	ovis_aries_rambouillet	ENSOARP00020004194	16.1765	10.049
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020013785	78.8344	64.4172	ovis_aries_rambouillet	ENSOARP00020004194	62.9902	51.4706
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020010670	18.3857	9.41704	ovis_aries_rambouillet	ENSOARP00020004194	30.1471	15.4412
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020020802	27.8378	13.2432	ovis_aries_rambouillet	ENSOARP00020004194	25.2451	12.0098
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020030868	32.1586	19.6035	ovis_aries_rambouillet	ENSOARP00020004194	35.7843	21.8137
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020033230	25.5	14	ovis_aries_rambouillet	ENSOARP00020004194	12.5	6.86275
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020027504	31.3559	20.7627	ovis_aries_rambouillet	ENSOARP00020004194	18.1373	12.0098
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020019086	18.3254	10.1106	ovis_aries_rambouillet	ENSOARP00020004194	28.4314	15.6863
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020014355	19.7211	10.9562	ovis_aries_rambouillet	ENSOARP00020004194	24.2647	13.4804
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020003902	19.1011	11.236	ovis_aries_rambouillet	ENSOARP00020004194	29.1667	17.1569
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020020351	34.0476	20.9524	ovis_aries_rambouillet	ENSOARP00020004194	35.049	21.5686
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020009015	29.9528	18.8679	ovis_aries_rambouillet	ENSOARP00020004194	31.1275	19.6078
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020018861	25.1208	12.3188	ovis_aries_rambouillet	ENSOARP00020004194	25.4902	12.5
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020033745	21.8182	11.6667	ovis_aries_rambouillet	ENSOARP00020004194	35.2941	18.8725
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020016633	22.1106	11.7253	ovis_aries_rambouillet	ENSOARP00020004194	32.3529	17.1569
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020026324	14.1631	8.15451	ovis_aries_rambouillet	ENSOARP00020004194	8.08823	4.65686
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020025474	25.9162	13.3508	ovis_aries_rambouillet	ENSOARP00020004194	24.2647	12.5
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020003137	34.398	20.3931	ovis_aries_rambouillet	ENSOARP00020004194	34.3137	20.3431
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020025647	13.871	7.09677	ovis_aries_rambouillet	ENSOARP00020004194	10.5392	5.39216
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020028472	22.956	11.9497	ovis_aries_rambouillet	ENSOARP00020004194	35.7843	18.6275

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	59.3137	47.0588	ciona_intestinalis	ENSCINP00000009765	62.0513	49.2308
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	55.6373	45.8333	drosophila_melanogaster	FBpp0303246	33.1871	27.3392
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	56.8627	43.8725	drosophila_melanogaster	FBpp0428415	62.5337	48.248
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	71.5686	66.4216	eptatretus_burgeri	ENSEBUP00000012909	77.4536	71.8833
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	65.4412	65.1961	laticauda_laticaudata	ENSLLTP00000008930	99.6269	99.2537
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	55.6373	44.6078	ciona_savignyi	ENSCSAVP00000005772	56.6085	45.3865
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	69.1176	68.1373	neolamprologus_brichardi	ENSNBRP00000031288	93.3775	92.053
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	76.7157	69.3627	sus_scrofa_usmarc	ENSSSCP00070052118	80.4627	72.7506
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	76.4706	69.3627	sus_scrofa_jinhua	ENSSSCP00060044742	80.6202	73.1266
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	76.4706	69.3627	sus_scrofa_pietrain	ENSSSCP00055016113	80.6202	73.1266
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	76.4706	69.3627	sus_scrofa_berkshire	ENSSSCP00065017361	80.6202	73.1266
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	76.4706	69.3627	sus_scrofa_landrace	ENSSSCP00045001214	80.6202	73.1266
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	76.4706	69.3627	sus_scrofa_tibetan	ENSSSCP00015000618	80.6202	73.1266
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	76.4706	69.3627	sus_scrofa_meishan	ENSSSCP00040041127	80.6202	73.1266
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	76.4706	69.3627	sus_scrofa_hampshire	ENSSSCP00035010753	80.6202	73.1266
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	76.4706	69.3627	sus_scrofa_rongchang	ENSSSCP00030045230	80.6202	73.1266
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	76.7157	69.3627	sus_scrofa_wuzhishan	ENSSSCP00005009138	80.6701	72.9381
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	67.6471	64.951	sus_scrofa_largewhite	ENSSSCP00025026524	97.5265	93.6396
ENSOARG00020002841	ovis_aries_rambouillet	ENSOARP00020004194	76.4706	69.3627	sus_scrofa_bamei	ENSSSCP00050000361	80.6202	73.1266

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression