RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSOANG00000006139	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	17941 bases	Strand	Plus strand
Position	13 : 6503480 - 6521420	RNA binding domain	MIF4G , MA3
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOANP00000009803	MIF4G	PF02854	3.8e-17	1
ENSOANP00000009803	MA3	PF02847	2e-22	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSOANT00000009805	2651	872aa	ENSOANP00000009803

Gene Model

Click here to download ENSOANG00000006139's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOANG00000006139's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOANG00000006139

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	71.789	60.2064	macaca_fascicularis	ENSMFAP00000011063	72.5377	60.8343
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	71.789	60.0917	macaca_mulatta	ENSMMUP00000051256	72.5377	60.7184
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	71.6743	59.9771	cercocebus_atys	ENSCATP00000011330	72.2543	60.4624
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	72.8211	61.2385	dasypus_novemcinctus	ENSDNOP00000017803	71.4286	60.0675
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	70.5275	59.1743	callithrix_jacchus	ENSCJAP00000007851	71.4286	59.9303
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	71.2156	59.1743	panthera_pardus	ENSPPRP00000027777	72.8019	60.4924
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	71.6743	60.2064	macaca_nemestrina	ENSMNEP00000040432	72.4218	60.8343
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	71.445	59.9771	chlorocebus_sabaeus	ENSCSAP00000002730	73.9027	62.0403
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	59.7477	49.8853	aotus_nancymaae	ENSANAP00000004668	69.9329	58.3893
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	71.3303	59.4037	saimiri_boliviensis_boliviensis	ENSSBOP00000010904	72.2416	60.1626
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	62.6147	47.5917	oryzias_sinensis	ENSOSIP00000009564	65.4676	49.7602
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	61.9266	48.0505	kryptolebias_marmoratus	ENSKMAP00000017127	66.1765	51.348
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	26.3761	14.1055	amphiprion_ocellaris	ENSAOCP00000031757	32.2581	17.2511
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	34.0596	17.3165	nothobranchius_furzeri	ENSNFUP00015024848	30.5242	15.519
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	62.5	47.2477	oryzias_javanicus	ENSOJAP00000007527	66.1408	50
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	60.8945	46.6743	gasterosteus_aculeatus	ENSGACP00000005154	67.7296	51.9133
ENSOANG00000006139	ornithorhynchus_anatinus	ENSOANP00000009803	34.8624	18.6927	erpetoichthys_calabaricus	ENSECRP00000012334	30.6452	16.4315

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression