RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSOANG00000001000	Gene ID		Accession	-
Symbol	APOBEC4	Alias	-	Full Name	apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4
Status	Confidence	Length	1110 bases	Strand	Minus strand
Position	16 : 11095743 - 11096852	RNA binding domain	APOBEC_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOANP00000001591	APOBEC_N	PF08210	2.4e-24	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
APOBEC4-201	ENSOANT00000001592	1110	369aa	ENSOANP00000001591

Gene Model

Click here to download ENSOANG00000001000's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOANG00000001000's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOANG00000001000

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	70.4607	55.0135	papio_anubis	ENSPANP00000051725	71.6253	55.9229
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	73.7127	57.7236	equus_asinus	ENSEASP00005009097	74.3169	58.1967
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.3577	58.2656	gorilla_gorilla	ENSGGOP00000039593	72.5543	58.4239
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.8997	55.8266	choloepus_hoffmanni	ENSCHOP00000010963	73.297	56.1308
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	70.1897	54.7425	macaca_fascicularis	ENSMFAP00000053404	71.3499	55.6474
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	69.9187	54.7425	macaca_mulatta	ENSMMUP00000073864	71.0744	55.6474
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	74.5257	57.1816	dasypus_novemcinctus	ENSDNOP00000029194	74.7283	57.337
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	71.5447	55.8266	bos_taurus	ENSBTAP00000053895	71.9346	56.1308
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.0867	55.8266	callithrix_jacchus	ENSCJAP00000055173	72.0867	55.8266
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.6287	57.1816	sarcophilus_harrisii	ENSSHAP00000016218	71.6578	56.4171
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	65.5827	49.5935	mus_musculus	ENSMUSP00000069723	64.7059	48.9305
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.3577	56.0976	panthera_pardus	ENSPPRP00000024510	72.5543	56.25
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	71.8157	55.8266	delphinapterus_leucas	ENSDLEP00000028943	72.2071	56.1308
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.6287	56.3686	ursus_americanus	ENSUAMP00000005745	73.0245	56.6758
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	73.1707	57.4526	pongo_abelii	ENSPPYP00000000482	73.3696	57.6087
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	67.4797	50.9485	camelus_dromedarius	ENSCDRP00005005091	68.0328	51.3661
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	73.1707	56.3686	vulpes_vulpes	ENSVVUP00000012279	73.3696	56.5217
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	71.8157	57.4526	homo_sapiens	ENSP00000310622	72.2071	57.7657
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.6287	56.3686	felis_catus	ENSFCAP00000010134	72.8261	56.5217
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.3577	55.8266	physeter_catodon	ENSPCTP00005003883	72.752	56.1308
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	63.6856	47.9675	cricetulus_griseus_chok1gshd	ENSCGRP00001003704	68.314	51.4535
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.6287	56.0976	canis_lupus_familiaris	ENSCAFP00845006712	73.0245	56.4033
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	71.2737	57.1816	pan_paniscus	ENSPPAP00000030576	73.6695	59.1036
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.8997	56.3686	ursus_maritimus	ENSUMAP00000022248	73.297	56.6758
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	73.9837	57.1816	equus_caballus	ENSECAP00000017178	74.5902	57.6503
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	69.3767	54.2005	sus_scrofa	ENSSSCP00000016497	69.9454	54.6448
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.3577	56.3686	ailuropoda_melanoleuca	ENSAMEP00000002614	71.2	55.4667
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	64.7696	48.2385	mus_spretus	MGP_SPRETEiJ_P0021431	64.7696	48.2385
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	71.8157	57.7236	pan_troglodytes	ENSPTRP00000082979	72.2071	58.0381
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	63.6856	50.9485	heterocephalus_glaber_female	ENSHGLP00000046273	69.1176	55.2941
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.0867	56.0976	otolemur_garnettii	ENSOGAP00000002791	73.2782	57.0248
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	71.5447	55.5556	phocoena_sinus	ENSPSNP00000004472	71.9346	55.8583
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	69.6477	54.4715	chlorocebus_sabaeus	ENSCSAP00000017753	70.7989	55.3719
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	65.0406	49.0515	mus_spicilegus	ENSMSIP00000008472	64.1711	48.3957
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	65.3117	49.0515	mus_caroli	MGP_CAROLIEiJ_P0020369	64.4385	48.3957
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	58.2656	44.7154	procavia_capensis	ENSPCAP00000014146	58.4239	44.837
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.8997	55.8266	mustela_putorius_furo	ENSMPUP00000011662	72.5067	55.5256
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	65.5827	49.0515	mus_pahari	MGP_PahariEiJ_P0075648	64.7059	48.3957
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	70.1897	55.0135	moschus_moschiferus	ENSMMSP00000017251	70.5722	55.3134
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	71.5447	55.8266	bos_indicus_hybrid	ENSBIXP00005043440	71.9346	56.1308
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.3577	56.0976	panthera_leo	ENSPLOP00000029330	72.5543	56.25
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	73.9837	58.8076	vombatus_ursinus	ENSVURP00010013421	72.4138	57.5597
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	70.4607	54.7425	capra_hircus	ENSCHIP00000008974	69.3333	53.8667
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	57.4526	44.9865	nannospalax_galili	ENSNGAP00000017070	67.5159	52.8662
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	71.0027	56.9106	phascolarctos_cinereus	ENSPCIP00000004608	71.1957	57.0652
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.8997	56.6396	pteropus_vampyrus	ENSPVAP00000001038	73.297	56.9482
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.6287	56.6396	prolemur_simus	ENSPSMP00000018302	73.6264	57.4176
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.3577	55.0135	neovison_vison	ENSNVIP00000015293	72.9508	55.4645
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	73.1707	56.6396	rhinolophus_ferrumequinum	ENSRFEP00010032684	73.1707	56.6396
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	65.0406	49.3225	rattus_norvegicus	ENSRNOP00000077092	61.8557	46.9072
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.0867	56.0976	bison_bison_bison	ENSBBBP00000026877	72.0867	56.0976
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	71.8157	56.0976	tursiops_truncatus	ENSTTRP00000014018	72.2071	56.4033
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	61.5176	47.9675	octodon_degus	ENSODEP00000013208	66.9617	52.2124
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	70.1897	55.5556	catagonus_wagneri	ENSCWAP00000026714	70.765	56.0109
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	67.4797	49.5935	peromyscus_maniculatus_bairdii	ENSPEMP00000021546	69.7479	51.2605
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	70.4607	55.5556	cervus_hanglu_yarkandensis	ENSCHYP00000032055	70.8447	55.8583
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.0867	57.1816	nomascus_leucogenys	ENSNLEP00000039833	72.2826	57.337
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	73.1707	56.9106	tupaia_belangeri	ENSTBEP00000005559	73.7705	57.377
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	71.8157	55.8266	monodon_monoceros	ENSMMNP00015013288	72.2071	56.1308
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.3577	56.3686	bos_grunniens	ENSBGRP00000021842	72.3577	56.3686
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	66.3957	50.6775	bos_mutus	ENSBMUP00000028667	68.2451	52.0891
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.6287	56.0976	canis_lupus_dingo	ENSCAFP00020019534	73.0245	56.4033
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	71.8157	56.0976	ovis_aries_rambouillet	ENSOARP00020006612	71.6216	55.9459
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.3577	57.4526	monodelphis_domestica	ENSMODP00000057205	72.1622	57.2973
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	64.4986	49.8645	monodelphis_domestica	ENSMODP00000054595	63.13	48.8064
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	70.7317	56.6396	myotis_lucifugus	ENSMLUP00000002228	70.9239	56.7935
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.6287	55.8266	balaenoptera_musculus	ENSBMSP00010000827	73.0245	56.1308
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	72.0867	55.5556	panthera_tigris_altaica	ENSPTIP00000002515	72.2826	55.7065
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	68.5637	50.4065	dipodomys_ordii	ENSDORP00000006879	72.2857	53.1429
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	43.0894	30.6233	petromyzon_marinus	ENSPMAP00000006785	43.4426	30.8743
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	55.5556	42.0054	callorhinchus_milii	ENSCMIP00000044836	56.1644	42.4658
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	61.7886	47.1545	latimeria_chalumnae	ENSLACP00000016461	63.3333	48.3333
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	37.3984	24.6612	lepisosteus_oculatus	ENSLOCP00000012650	52.6718	34.7328
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	47.6965	32.7913	clupea_harengus	ENSCHAP00000061511	49.5775	34.0845
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	45.5285	32.7913	oncorhynchus_kisutch	ENSOKIP00005084218	48.1375	34.6705
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	46.0705	32.2493	oncorhynchus_mykiss	ENSOMYP00000136735	47.619	33.3333
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	62.6016	45.7995	xenopus_tropicalis	ENSXETP00000037927	63.8122	46.6851
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	69.9187	53.6585	chrysemys_picta_bellii	ENSCPBP00000021913	69.9187	53.6585
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	69.6477	50.6775	sphenodon_punctatus	ENSSPUP00000014119	69.4595	50.5405
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	58.5366	43.0894	laticauda_laticaudata	ENSLLTP00000001118	54.2714	39.9497
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	58.2656	43.9024	pseudonaja_textilis	ENSPTXP00000004900	62.8655	47.3684
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	58.8076	43.9024	notechis_scutatus	ENSNSUP00000019868	57.2559	42.7441
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	57.7236	43.3604	gallus_gallus	ENSGALP00010015817	62.2807	46.7836
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	60.9756	45.5285	salvator_merianae	ENSSMRP00000015947	60.4839	45.1613
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	53.9295	40.3794	coturnix_japonica	ENSCJPP00005027480	56.0563	41.9718
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	62.6016	47.6965	podarcis_muralis	ENSPMRP00000011392	66.1891	50.4298
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	59.6206	44.1734	naja_naja	ENSNNAP00000022351	62.3229	46.1756
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	60.4336	45.7995	anolis_carolinensis	ENSACAP00000014906	64.2651	48.7032
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	56.6396	41.7344	strigops_habroptila	ENSSHBP00005017350	60.2305	44.3804
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	69.6477	52.0325	chelonoidis_abingdonii	ENSCABP00000004774	66.9271	50
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	43.6314	30.8943	oncorhynchus_tshawytscha	ENSOTSP00005090372	47.2141	33.4311
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	57.4526	44.1734	struthio_camelus_australis	ENSSCUP00000006557	64.6341	49.6951
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	43.9024	32.2493	hucho_hucho	ENSHHUP00000069564	47.2303	34.6939
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	56.6396	42.8184	aquila_chrysaetos_chrysaetos	ENSACCP00020009441	58.5434	44.2577
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	59.0786	45.7995	leptobrachium_leishanense	ENSLLEP00000014802	59.8901	46.4286
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	47.9675	34.4173	erpetoichthys_calabaricus	ENSECRP00000032565	55.4859	39.8119
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	66.1247	50.4065	terrapene_carolina_triunguis	ENSTMTP00000004966	65.4156	49.866
ENSOANG00000001000	ornithorhynchus_anatinus	ENSOANP00000001591	66.1247	50.4065	terrapene_carolina_triunguis	ENSTMTP00000018428	65.4156	49.866

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression