Description

Ensembl ID ENSNVIG00000018878 Gene ID Accession -
Symbol AFF3 Alias - Full Name AF4/FMR2 family member 3
Status Confidence Length 534536 bases Strand Minus strand
Position FNWR01000443.1 : 344400 - 878935 RNA binding domain AF-4
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSNVIP00000024568 AF-4 PF05110 8.1e-134 1
ENSNVIP00000024568 AF-4 PF05110 8.1e-134 2
ENSNVIP00000024551 AF-4 PF05110 8.8e-134 1
ENSNVIP00000024551 AF-4 PF05110 8.8e-134 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
AFF3-201 ENSNVIT00000028490 3762 1253aa ENSNVIP00000024551
AFF3-202 ENSNVIT00000028507 3687 1228aa ENSNVIP00000024568

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSNVIG00000018878neovison_visonENSNVIP0000002384250.114436.6133neovison_visonENSNVIP0000002455152.434238.3081
ENSNVIG00000018878neovison_visonENSNVIP0000002220851.8935.567neovison_visonENSNVIP0000002455148.204333.0407
ENSNVIG00000018878neovison_visonENSNVIP0000003226744.751830.0244neovison_visonENSNVIP0000002455143.894729.4493

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSNVIG00000018878neovison_visonENSNVIP0000002455169.034360.3352ornithorhynchus_anatinusENSOANP0000005350272.445663.3166
ENSNVIG00000018878neovison_visonENSNVIP0000002455185.315279.0902sarcophilus_harrisiiENSSHAP0000003621873.11967.7839
ENSNVIG00000018878neovison_visonENSNVIP0000002455168.715162.9689notamacropus_eugeniiENSMEUP0000001271872.352966.3025
ENSNVIG00000018878neovison_visonENSNVIP0000002455149.561147.5658choloepus_hoffmanniENSCHOP0000000213349.799547.7947
ENSNVIG00000018878neovison_visonENSNVIP0000002455121.069419.7127dasypus_novemcinctusENSDNOP0000002059977.419472.434
ENSNVIG00000018878neovison_visonENSNVIP0000002455158.020854.9082dasypus_novemcinctusENSDNOP0000003193789.975385.1485
ENSNVIG00000018878neovison_visonENSNVIP0000002455177.414275.6584erinaceus_europaeusENSEEUP0000000447088.021886.0254
ENSNVIG00000018878neovison_visonENSNVIP0000002455162.729560.7342echinops_telfairiENSETEP0000001017063.74761.7194
ENSNVIG00000018878neovison_visonENSNVIP0000002455194.732691.6201callithrix_jacchusENSCJAP0000001855694.884191.7666
ENSNVIG00000018878neovison_visonENSNVIP0000002455194.892392.2586cercocebus_atysENSCATP0000004565295.04492.4061
ENSNVIG00000018878neovison_visonENSNVIP0000002455189.704786.4326macaca_fascicularisENSMFAP0000004847192.055788.6978
ENSNVIG00000018878neovison_visonENSNVIP0000002455192.737489.9441macaca_mulattaENSMMUP0000006625794.857192
ENSNVIG00000018878neovison_visonENSNVIP0000002455175.41972.2267macaca_nemestrinaENSMNEP0000001530392.920488.9872
ENSNVIG00000018878neovison_visonENSNVIP0000002455194.732691.9393papio_anubisENSPANP0000003352894.884192.0863
ENSNVIG00000018878neovison_visonENSNVIP0000002455166.799763.9266mandrillus_leucophaeusENSMLEP0000003530893.624289.5973
ENSNVIG00000018878neovison_visonENSNVIP0000002455195.371192.498gorilla_gorillaENSGGOP0000002873795.523692.6459
ENSNVIG00000018878neovison_visonENSNVIP0000002455190.742287.8691pan_paniscusENSPPAP0000001791595.385992.3658
ENSNVIG00000018878neovison_visonENSNVIP0000002455193.934690.9816pan_troglodytesENSPTRP0000002104395.458292.4574
ENSNVIG00000018878neovison_visonENSNVIP0000002455194.972192.1788pongo_abeliiENSPPYP0000001348795.123992.3261
ENSNVIG00000018878neovison_visonENSNVIP0000002455193.296190.423homo_sapiensENSP0000050041995.350792.4144
ENSNVIG00000018878neovison_visonENSNVIP0000002455197.126995.7701canis_lupus_familiarisENSCAFP0084502352297.3696
ENSNVIG00000018878neovison_visonENSNVIP0000002455193.375991.7797vulpes_vulpesENSVVUP0000004018493.152991.5605
ENSNVIG00000018878neovison_visonENSNVIP0000002455192.09990.423ailuropoda_melanoleucaENSAMEP0000001390790.015688.3775
ENSNVIG00000018878neovison_visonENSNVIP0000002455190.82290.423mustela_putorius_furoENSMPUP0000001199893.508693.0978
ENSNVIG00000018878neovison_visonENSNVIP0000002455197.685696.7279panthera_leoENSPLOP0000001930197.763696.8051
ENSNVIG00000018878neovison_visonENSNVIP0000002455197.286596.0894felis_catusENSFCAP0000002460397.44296.243
ENSNVIG00000018878neovison_visonENSNVIP0000002455190.662487.8691tursiops_truncatusENSTTRP0000001334592.659189.8042
ENSNVIG00000018878neovison_visonENSNVIP0000002455197.685696.7279panthera_pardusENSPPRP0000002394997.763696.8051
ENSNVIG00000018878neovison_visonENSNVIP0000002455186.432683.7191delphinapterus_leucasENSDLEP0000000149391.392488.5232
ENSNVIG00000018878neovison_visonENSNVIP0000002455193.455790.9816physeter_catodonENSPCTP0000501538094.435591.9355
ENSNVIG00000018878neovison_visonENSNVIP0000002455193.774991.7797equus_asinusENSEASP0000502679695.996793.9542
ENSNVIG00000018878neovison_visonENSNVIP0000002455192.338488.8268loxodonta_africanaENSLAFP0000001077693.231389.6857
ENSNVIG00000018878neovison_visonENSNVIP0000002455168.395965.6824procavia_capensisENSPCAP0000001029269.561766.8019
ENSNVIG00000018878neovison_visonENSNVIP0000002455194.014491.2211sus_scrofaENSSSCP0000004133494.089591.2939
ENSNVIG00000018878neovison_visonENSNVIP0000002455195.929893.7749equus_caballusENSECAP0000008368394.720392.5926
ENSNVIG00000018878neovison_visonENSNVIP0000002455192.09988.8268bos_taurusENSBTAP0000001652394.050590.709
ENSNVIG00000018878neovison_visonENSNVIP0000002455191.540388.348capra_hircusENSCHIP0000003284293.403990.1466
ENSNVIG00000018878neovison_visonENSNVIP0000002455161.452558.1804ovis_aries_rambouilletENSOARP0002001522385.271380.7309
ENSNVIG00000018878neovison_visonENSNVIP0000002455167.198763.1285ochotona_princepsENSOPRP0000000403967.198763.1285
ENSNVIG00000018878neovison_visonENSNVIP0000002455188.587484.7566oryctolagus_cuniculusENSOCUP0000002067385.846982.1346
ENSNVIG00000018878neovison_visonENSNVIP0000002455182.521979.4094dipodomys_ordiiENSDORP0000000683992.735489.2377
ENSNVIG00000018878neovison_visonENSNVIP0000002455190.742286.9912cricetulus_griseus_chok1gshdENSCGRP0000101344593.044289.198
ENSNVIG00000018878neovison_visonENSNVIP0000002455190.023985.7143mus_caroliMGP_CAROLIEiJ_P001727291.707387.3171
ENSNVIG00000018878neovison_visonENSNVIP000000245519.257788.93855mesocricetus_auratusENSMAUP0000001280196.666793.3333
ENSNVIG00000018878neovison_visonENSNVIP0000002455191.859587.3105mus_musculusENSMUSP0000015914791.786387.2408
ENSNVIG00000018878neovison_visonENSNVIP0000002455189.784585.7143mus_spretusMGP_SPRETEiJ_P001827291.761887.602
ENSNVIG00000018878neovison_visonENSNVIP0000002455189.545185.3951mus_spicilegusENSMSIP0000002606191.741687.4898
ENSNVIG00000018878neovison_visonENSNVIP0000002455189.545185.6345mus_pahariMGP_PahariEiJ_P007262091.591887.5918
ENSNVIG00000018878neovison_visonENSNVIP0000002455190.263486.1133rattus_norvegicusENSRNOP0000007203788.636484.5611
ENSNVIG00000018878neovison_visonENSNVIP0000002455174.700771.1891cavia_porcellusENSCPOP0000000571891.228186.9396
ENSNVIG00000018878neovison_visonENSNVIP0000002455161.213158.0208heterocephalus_glaber_femaleENSHGLP0000000685686.373981.8694
ENSNVIG00000018878neovison_visonENSNVIP0000002455126.097424.7406heterocephalus_glaber_femaleENSHGLP0000004949692.112787.3239
ENSNVIG00000018878neovison_visonENSNVIP0000002455163.527558.739octodon_degusENSODEP0000001045483.350877.0681
ENSNVIG00000018878neovison_visonENSNVIP000000245519.337599.25778octodon_degusENSODEP0000001474497.596.6667
ENSNVIG00000018878neovison_visonENSNVIP0000002455151.077446.9274monodelphis_domesticaENSMODP0000004032082.901676.1658
ENSNVIG00000018878neovison_visonENSNVIP0000002455162.968961.2131ursus_maritimusENSUMAP0000001049192.932990.3416
ENSNVIG00000018878neovison_visonENSNVIP0000002455121.947321.5483ursus_maritimusENSUMAP0000001037477.464876.0563
ENSNVIG00000018878neovison_visonENSNVIP0000002455166.24162.8093bos_grunniensENSBGRP0000004294891.008886.2939
ENSNVIG00000018878neovison_visonENSNVIP0000002455150.438946.4485vombatus_ursinusENSVURP0001000311681.548475.0968
ENSNVIG00000018878neovison_visonENSNVIP0000002455184.99680.5267bos_indicus_hybridENSBIXP0000503273784.189779.7628
ENSNVIG00000018878neovison_visonENSNVIP0000002455195.450993.1365microcebus_murinusENSMICP0000004208594.99692.6926
ENSNVIG00000018878neovison_visonENSNVIP0000002455191.300988.6672otolemur_garnettiiENSOGAP0000001189092.556689.8867
ENSNVIG00000018878neovison_visonENSNVIP0000002455174.381571.8276chinchilla_lanigeraENSCLAP0000002491092.644189.4632
ENSNVIG00000018878neovison_visonENSNVIP0000002455170.151667.917aotus_nancymaaeENSANAP0000002477294.414691.4071
ENSNVIG00000018878neovison_visonENSNVIP0000002455157.861153.312phascolarctos_cinereusENSPCIP0000001806682.199575.737
ENSNVIG00000018878neovison_visonENSNVIP0000002455173.583471.0295tupaia_belangeriENSTBEP0000000472574.959472.3577
ENSNVIG00000018878neovison_visonENSNVIP0000002455194.57391.6999monodon_monocerosENSMMNP0001502615195.028192.1411
ENSNVIG00000018878neovison_visonENSNVIP0000002455193.774990.9816saimiri_boliviensis_boliviensisENSSBOP0000002014495.29692.4574
ENSNVIG00000018878neovison_visonENSNVIP0000002455153.950550.1197sorex_araneusENSSARP0000000123157.239653.1753
ENSNVIG00000018878neovison_visonENSNVIP0000002455192.89789.5451catagonus_wagneriENSCWAP0000000167793.194689.8319
ENSNVIG00000018878neovison_visonENSNVIP0000002455194.413491.6201phocoena_sinusENSPSNP0000001072795.020192.2088
ENSNVIG00000018878neovison_visonENSNVIP0000002455191.380788.1085ictidomys_tridecemlineatusENSSTOP0000001089693.929590.566
ENSNVIG00000018878neovison_visonENSNVIP0000002455193.854890.5826sciurus_vulgarisENSSVLP0000501697093.556190.2943
ENSNVIG00000018878neovison_visonENSNVIP0000002455188.74785.7143bison_bison_bisonENSBBBP0000002692289.031285.9888
ENSNVIG00000018878neovison_visonENSNVIP0000002455194.253891.0615rhinolophus_ferrumequinumENSRFEP0001003342794.935791.7203
ENSNVIG00000018878neovison_visonENSNVIP0000002455189.465385.7143jaculus_jaculusENSJJAP0000000924493.183789.2768
ENSNVIG00000018878neovison_visonENSNVIP0000002455154.748652.514myotis_lucifugusENSMLUP0000001390692.953989.1599
ENSNVIG00000018878neovison_visonENSNVIP0000002455171.029568.1564chlorocebus_sabaeusENSCSAP0000001322993.291489.5178
ENSNVIG00000018878neovison_visonENSNVIP0000002455193.296190.3432moschus_moschiferusENSMMSP0000000241893.820290.8507
ENSNVIG00000018878neovison_visonENSNVIP0000002455192.976990.0239rhinopithecus_bietiENSRBIP0000001212895.10292.0816
ENSNVIG00000018878neovison_visonENSNVIP0000002455190.42387.7095nomascus_leucogenysENSNLEP0000001741394.970792.1207
ENSNVIG00000018878neovison_visonENSNVIP0000002455182.202779.2498bos_mutusENSBMUP0000003541485.264982.202
ENSNVIG00000018878neovison_visonENSNVIP0000002455191.939388.747cervus_hanglu_yarkandensisENSCHYP0000001661192.1688.96
ENSNVIG00000018878neovison_visonENSNVIP0000002455195.8593.2961propithecus_coquereliENSPCOP0000001100196.156993.5949
ENSNVIG00000018878neovison_visonENSNVIP0000002455167.198765.3631panthera_tigris_altaicaENSPTIP0000002172595.248992.6471
ENSNVIG00000018878neovison_visonENSNVIP0000002455194.972192.099rhinopithecus_roxellanaENSRROP0000001955795.123992.2462
ENSNVIG00000018878neovison_visonENSNVIP0000002455189.066285.1556peromyscus_maniculatus_bairdiiENSPEMP0000001524590.584486.6071
ENSNVIG00000018878neovison_visonENSNVIP0000002455192.019288.9864pteropus_vampyrusENSPVAP0000000622992.313989.2714
ENSNVIG00000018878neovison_visonENSNVIP0000002455195.770193.5355prolemur_simusENSPSMP0000002753195.617593.3865
ENSNVIG00000018878neovison_visonENSNVIP0000002455165.203562.8093cebus_imitatorENSCCAP0000001145294.779691.2993
ENSNVIG00000018878neovison_visonENSNVIP0000002455173.982469.8324carlito_syrichtaENSTSYP0000003499887.867382.9384
ENSNVIG00000018878neovison_visonENSNVIP0000002455191.141388.348nannospalax_galiliENSNGAP0000000264593.376990.5151
ENSNVIG00000018878neovison_visonENSNVIP000000245519.257788.93855microtus_ochrogasterENSMOCP0000000601496.666793.3333
ENSNVIG00000018878neovison_visonENSNVIP0000002455171.26967.4381microtus_ochrogasterENSMOCP0000000559690.476285.613
ENSNVIG00000018878neovison_visonENSNVIP0000002455136.472521.4685drosophila_melanogasterFBpp007731827.316216.0789
ENSNVIG00000018878neovison_visonENSNVIP0000002455132.881119.2338ciona_intestinalisENSCINP0000001231238.007422.2325
ENSNVIG00000018878neovison_visonENSNVIP0000002455148.683235.5946petromyzon_marinusENSPMAP0000000860549.633936.2897
ENSNVIG00000018878neovison_visonENSNVIP0000002455147.565834.6369eptatretus_burgeriENSEBUP0000001945045.185732.9037
ENSNVIG00000018878neovison_visonENSNVIP0000002455143.655233.5196callorhinchus_miliiENSCMIP0000000033564.277349.3537
ENSNVIG00000018878neovison_visonENSNVIP0000002455114.844411.0934callorhinchus_miliiENSCMIP0000000028753.602340.0576
ENSNVIG00000018878neovison_visonENSNVIP0000002455115.482812.6895latimeria_chalumnaeENSLACP0000000430358.787948.1818
ENSNVIG00000018878neovison_visonENSNVIP0000002455146.528338.5475latimeria_chalumnaeENSLACP0000001057474.839562.0026
ENSNVIG00000018878neovison_visonENSNVIP0000002455149.561138.8667xenopus_tropicalisENSXETP0000006340664.687550.7292
ENSNVIG00000018878neovison_visonENSNVIP0000002455150.438945.1716crocodylus_porosusENSCPRP0000501748479.496971.195
ENSNVIG00000018878neovison_visonENSNVIP0000002455119.632916.9992crocodylus_porosusENSCPRP0000501752568.715159.4972
ENSNVIG00000018878neovison_visonENSNVIP0000002455178.77169.7526chrysemys_picta_belliiENSCPBP0000000941179.596870.4839
ENSNVIG00000018878neovison_visonENSNVIP0000002455149.880343.6552sphenodon_punctatusENSSPUP0000001276177.255967.6143
ENSNVIG00000018878neovison_visonENSNVIP0000002455143.655236.3927laticauda_laticaudataENSLLTP0000000253472.450360.3974
ENSNVIG00000018878neovison_visonENSNVIP0000002455161.532351.3168notechis_scutatusENSNSUP0000000279473.63961.4136
ENSNVIG00000018878neovison_visonENSNVIP0000002455162.250651.7957pseudonaja_textilisENSPTXP0000000279972.829160.5976
ENSNVIG00000018878neovison_visonENSNVIP0000002455149.880344.2937anas_platyrhynchos_platyrhynchosENSAPLP0000002746473.61665.371
ENSNVIG00000018878neovison_visonENSNVIP0000002455120.271318.3559anas_platyrhynchos_platyrhynchosENSAPLP0000001596773.198866.2824
ENSNVIG00000018878neovison_visonENSNVIP0000002455118.994418.2761meleagris_gallopavoENSMGAP0000001567495.291.6
ENSNVIG00000018878neovison_visonENSNVIP0000002455118.834816.8396meleagris_gallopavoENSMGAP0000001567880.821972.2603
ENSNVIG00000018878neovison_visonENSNVIP0000002455172.545965.2833gallus_gallusENSGALP0001002210573.365666.021
ENSNVIG00000018878neovison_visonENSNVIP0000002455172.06764.7247parus_majorENSPMJP0000002042975.124867.4709
ENSNVIG00000018878neovison_visonENSNVIP0000002455171.66864.4054serinus_canariaENSSCAP0000002344176.490668.7393
ENSNVIG00000018878neovison_visonENSNVIP0000002455151.077442.6975anolis_carolinensisENSACAP0000002431375.117462.7934
ENSNVIG00000018878neovison_visonENSNVIP0000002455170.869962.3304pelodiscus_sinensisENSPSIP0000000706076.683967.4439
ENSNVIG00000018878neovison_visonENSNVIP0000002455115.323213.2482pelodiscus_sinensisENSPSIP0000000025871.375561.71
ENSNVIG00000018878neovison_visonENSNVIP0000002455161.931451.7957naja_najaENSNNAP0000002717673.624361.575
ENSNVIG00000018878neovison_visonENSNVIP0000002455161.851656.0255geospiza_fortisENSGFOP0000001263667.685661.31
ENSNVIG00000018878neovison_visonENSNVIP0000002455167.837261.6121ficedula_albicollisENSFALP0000000403776.507769.4869
ENSNVIG00000018878neovison_visonENSNVIP0000002455171.029563.8468taeniopygia_guttataENSTGUP0000002536568.094961.2089
ENSNVIG00000018878neovison_visonENSNVIP000000245518.699126.22506hucho_huchoENSHHUP0000002534166.463447.561
ENSNVIG00000018878neovison_visonENSNVIP0000002455167.039157.3823podarcis_muralisENSPMRP0000000853676.852765.7822
ENSNVIG00000018878neovison_visonENSNVIP0000002455116.360713.9665podarcis_muralisENSPMRP0000003371265.916456.2701
ENSNVIG00000018878neovison_visonENSNVIP0000002455149.241841.9792salvator_merianaeENSSMRP0000002795278.69967.0918
ENSNVIG00000018878neovison_visonENSNVIP0000002455118.116515.7223chelonoidis_abingdoniiENSCABP0000000502266.374357.6023
ENSNVIG00000018878neovison_visonENSNVIP0000002455155.067848.3639chelonoidis_abingdoniiENSCABP0000000501778.320168.7855
ENSNVIG00000018878neovison_visonENSNVIP0000002455171.189163.2083coturnix_japonicaENSCJPP0000500117072.402664.2857
ENSNVIG00000018878neovison_visonENSNVIP0000002455149.640944.2139anser_brachyrhynchusENSABRP0000001029175.120866.9082
ENSNVIG00000018878neovison_visonENSNVIP0000002455158.659253.3919struthio_camelus_australisENSSCUP0000000407382.214874.8322
ENSNVIG00000018878neovison_visonENSNVIP0000002455118.834816.2809gopherus_evgoodeiENSGEVP0000502799870.658761.0778
ENSNVIG00000018878neovison_visonENSNVIP0000002455154.98848.2841gopherus_evgoodeiENSGEVP0000502801875.548266.3377
ENSNVIG00000018878neovison_visonENSNVIP0000002455171.66864.565aquila_chrysaetos_chrysaetosENSACCP0002002167677.480669.8016
ENSNVIG00000018878neovison_visonENSNVIP0000002455157.382343.9745leptobrachium_leishanenseENSLLEP0000002398162.359147.7884
ENSNVIG00000018878neovison_visonENSNVIP0000002455174.381566.0814terrapene_carolina_triunguisENSTMTP0000000819280.068771.134
ENSNVIG00000018878neovison_visonENSNVIP0000002455171.827664.4852strigops_habroptilaENSSHBP0000501655775.821468.0708

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression