RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSNVIG00000009098	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2136 bases	Strand	Plus strand
Position	FNWR01000107.1 : 8519027 - 8521162	RNA binding domain	Ribosomal_L44
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSNVIP00000011472	Ribosomal_L44	PF00935	1.3e-11	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSNVIT00000013454	390	129aa	ENSNVIP00000011472

Gene Model

Click here to download ENSNVIG00000009098's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSNVIG00000009098's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNVIG00000009098	neovison_vison	ENSNVIP00000009778	73.5849	63.2075	neovison_vison	ENSNVIP00000011472	60.4651	51.938
ENSNVIG00000009098	neovison_vison	ENSNVIP00000006306	64.2336	54.0146	neovison_vison	ENSNVIP00000011472	68.2171	57.3643
ENSNVIG00000009098	neovison_vison	ENSNVIP00000018556	67.5676	57.6577	neovison_vison	ENSNVIP00000011472	58.1395	49.6124
ENSNVIG00000009098	neovison_vison	ENSNVIP00000000551	73.5849	64.1509	neovison_vison	ENSNVIP00000011472	60.4651	52.7132

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	67.4419	55.0388	sarcophilus_harrisii	ENSSHAP00000027853	40.0922	32.7189
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.1395	49.6124	notamacropus_eugenii	ENSMEUP00000013604	71.4286	60.9524
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	51.1628	42.6357	dasypus_novemcinctus	ENSDNOP00000025196	64.0777	53.3981
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	45.7364	40.3101	dasypus_novemcinctus	ENSDNOP00000018859	64.1304	56.5217
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	51.938	44.186	cercocebus_atys	ENSCATP00000040097	74.4444	63.3333
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.9147	51.938	mandrillus_leucophaeus	ENSMLEP00000001708	71.6981	63.2075
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	61.2403	52.7132	gorilla_gorilla	ENSGGOP00000028511	75.9615	65.3846
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.1395	50.3876	gorilla_gorilla	ENSGGOP00000021124	71.4286	61.9048
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	62.0155	53.4884	pan_paniscus	ENSPPAP00000005680	76.1905	65.7143
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	66.6667	55.0388	pan_troglodytes	ENSPTRP00000084070	68.8	56.8
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	53.4884	46.5116	pan_troglodytes	ENSPTRP00000092238	72.6316	63.1579
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	62.0155	52.7132	canis_lupus_familiaris	ENSCAFP00845021464	69.5652	59.1304
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	52.7132	vulpes_vulpes	ENSVVUP00000013996	72.6415	64.1509
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	64.3411	54.2636	vulpes_vulpes	ENSVVUP00000015138	64.3411	54.2636
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.9147	45.7364	vulpes_vulpes	ENSVVUP00000006831	49.6732	38.5621
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	56.5891	48.062	ursus_americanus	ENSUAMP00000016495	68.8679	58.4906
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	55.814	46.5116	ailuropoda_melanoleuca	ENSAMEP00000027836	68.5714	57.1429
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	61.2403	53.4884	panthera_leo	ENSPLOP00000018383	75.2381	65.7143
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	62.0155	52.7132	felis_catus	ENSFCAP00000047354	75.4717	64.1509
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	61.2403	53.4884	panthera_pardus	ENSPPRP00000027485	75.2381	65.7143
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	60.4651	51.938	physeter_catodon	ENSPCTP00005016108	73.5849	63.2075
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	71.3178	58.1395	physeter_catodon	ENSPCTP00005024652	64.7887	52.8169
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.1395	50.3876	balaenoptera_musculus	ENSBMSP00010014881	71.4286	61.9048
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	51.1628	balaenoptera_musculus	ENSBMSP00010015993	72.6415	62.2642
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	71.3178	58.9147	balaenoptera_musculus	ENSBMSP00010030751	55.7576	46.0606
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	55.0388	46.5116	sus_scrofa	ENSSSCP00000004738	66.9811	56.6038
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	51.1628	bos_taurus	ENSBTAP00000046898	72.6415	62.2642
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	57.3643	44.9612	oryctolagus_cuniculus	ENSOCUP00000017833	70.4762	55.2381
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	51.938	cricetulus_griseus_chok1gshd	ENSCGRP00001006209	72.6415	63.2075
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.9147	50.3876	mesocricetus_auratus	ENSMAUP00000006179	71.6981	61.3208
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	56.5891	48.062	heterocephalus_glaber_female	ENSHGLP00000028131	68.8679	58.4906
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	60.4651	52.7132	ursus_maritimus	ENSUMAP00000033032	73.5849	64.1509
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	56.5891	47.2868	bos_grunniens	ENSBGRP00000013124	71.5686	59.8039
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.1395	46.5116	vombatus_ursinus	ENSVURP00010000848	58.5938	46.875
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	51.1628	bos_indicus_hybrid	ENSBIXP00005011706	72.6415	62.2642
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.9147	51.1628	otolemur_garnettii	ENSOGAP00000021602	71.6981	62.2642
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.9147	49.6124	aotus_nancymaae	ENSANAP00000000467	73.0769	61.5385
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	61.2403	48.8372	monodon_monoceros	ENSMMNP00015027594	51.9737	41.4474
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	61.2403	51.938	saimiri_boliviensis_boliviensis	ENSSBOP00000001428	74.5283	63.2075
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	49.6124	sorex_araneus	ENSSARP00000001952	72.6415	60.3774
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	50.3876	43.4109	ictidomys_tridecemlineatus	ENSSTOP00000026804	67.7083	58.3333
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	56.5891	47.2868	bison_bison_bison	ENSBBBP00000024496	71.5686	59.8039
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.1395	50.3876	rhinolophus_ferrumequinum	ENSRFEP00010012879	70.7547	61.3208
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	61.2403	53.4884	moschus_moschiferus	ENSMMSP00000008702	74.5283	65.0943
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	51.938	nomascus_leucogenys	ENSNLEP00000038131	72.6415	63.2075
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	56.5891	47.2868	bos_mutus	ENSBMUP00000008438	71.5686	59.8039
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	62.0155	54.2636	panthera_tigris_altaica	ENSPTIP00000004780	75.4717	66.0377
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.1395	49.6124	peromyscus_maniculatus_bairdii	ENSPEMP00000004070	73.5294	62.7451
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.1395	50.3876	carlito_syrichta	ENSTSYP00000015534	70.7547	61.3208
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	44.9612	38.7597	nannospalax_galili	ENSNGAP00000019794	49.1525	42.3729
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	62.0155	52.7132	canis_lupus_dingo	ENSCAFP00020012692	69.5652	59.1304
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	48.062	callorhinchus_milii	ENSCMIP00000004264	50.9934	41.0596
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	29.4574	22.4806	astyanax_mexicanus	ENSAMXP00000027880	54.2857	41.4286
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	48.8372	poecilia_reticulata	ENSPREP00000018725	54.2254	44.3662
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	65.8915	57.3643	oryzias_latipes	ENSORLP00000030741	49.7076	43.2749
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	49.6124	xenopus_tropicalis	ENSXETP00000111246	72.6415	60.3774
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	49.6124	41.0853	chrysemys_picta_bellii	ENSCPBP00000025251	68.8172	56.9892
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	49.6124	sphenodon_punctatus	ENSSPUP00000022774	73.3333	60.9524
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	51.1628	geospiza_fortis	ENSGFOP00000003384	73.3333	62.8571
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	40.3101	31.0078	labrus_bergylta	ENSLBEP00000005280	38.5185	29.6296
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	49.6124	amphiprion_ocellaris	ENSAOCP00000015454	66.3793	55.1724
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	49.6124	39.5349	chelonoidis_abingdonii	ENSCABP00000029877	68.8172	54.8387
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	59.6899	51.1628	anser_brachyrhynchus	ENSABRP00000000761	73.3333	62.8571
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.9147	49.6124	hippocampus_comes	ENSHCOP00000021191	71.6981	60.3774
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	58.1395	50.3876	amphiprion_percula	ENSAPEP00000006826	70.7547	61.3208
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	65.8915	53.4884	stegastes_partitus	ENSSPAP00000013755	54.8387	44.5161
ENSNVIG00000009098	neovison_vison	ENSNVIP00000011472	57.3643	46.5116	leptobrachium_leishanense	ENSLLEP00000027703	56.0606	45.4545

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression