RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSNVIG00000007736	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	321 bases	Strand	Plus strand
Position	FNWR01000086.1 : 5807758 - 5808078	RNA binding domain	Ribosomal_L44
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSNVIP00000009778	Ribosomal_L44	PF00935	1.2e-33	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSNVIT00000011435	321	106aa	ENSNVIP00000009778

Gene Model

Click here to download ENSNVIG00000007736's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSNVIG00000007736's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNVIG00000007736	neovison_vison	ENSNVIP00000011472	60.4651	51.938	neovison_vison	ENSNVIP00000009778	73.5849	63.2075
ENSNVIG00000007736	neovison_vison	ENSNVIP00000006306	76.6423	75.9124	neovison_vison	ENSNVIP00000009778	99.0566	98.1132
ENSNVIG00000007736	neovison_vison	ENSNVIP00000018556	92.7928	90.991	neovison_vison	ENSNVIP00000009778	97.1698	95.283
ENSNVIG00000007736	neovison_vison	ENSNVIP00000000551	100	99.0566	neovison_vison	ENSNVIP00000009778	100	99.0566

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	98.1132	sarcophilus_harrisii	ENSSHAP00000027853	48.8479	47.9263
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	choloepus_hoffmanni	ENSCHOP00000008466	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	callithrix_jacchus	ENSCJAP00000008869	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	92.4528	90.566	macaca_fascicularis	ENSMFAP00000061495	92.4528	90.566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	92.4528	90.566	macaca_mulatta	ENSMMUP00000062084	92.4528	90.566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	macaca_nemestrina	ENSMNEP00000036729	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	93.3962	90.566	papio_anubis	ENSPANP00000060972	93.3962	90.566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	97.1698	96.2264	mandrillus_leucophaeus	ENSMLEP00000003574	97.1698	96.2264
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	gorilla_gorilla	ENSGGOP00000009240	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	pongo_abelii	ENSPPYP00000023470	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	homo_sapiens	ENSP00000446503	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	canis_lupus_familiaris	ENSCAFP00845027017	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	ursus_americanus	ENSUAMP00000003845	82.8125	82.0312
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	99.0566	98.1132	ailuropoda_melanoleuca	ENSAMEP00000009878	74.4681	73.7589
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	panthera_leo	ENSPLOP00000026632	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	felis_catus	ENSFCAP00000014277	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	tursiops_truncatus	ENSTTRP00000007228	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	physeter_catodon	ENSPCTP00005009096	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	balaenoptera_musculus	ENSBMSP00010027894	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	equus_asinus	ENSEASP00005043874	70.1987	69.5364
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	loxodonta_africana	ENSLAFP00000016108	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	sus_scrofa	ENSSSCP00000005385	35.4515	35.1171
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	bos_taurus	ENSBTAP00000020267	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	capra_hircus	ENSCHIP00000030747	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	ovis_aries_rambouillet	ENSOARP00020021994	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	oryctolagus_cuniculus	ENSOCUP00000023802	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	marmota_marmota_marmota	ENSMMMP00000017774	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	96.2264	95.283	cricetulus_griseus_chok1gshd	ENSCGRP00001004096	96.2264	95.283
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	cricetulus_griseus_chok1gshd	ENSCGRP00001009190	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	urocitellus_parryii	ENSUPAP00010012483	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	98.1132	97.1698	mesocricetus_auratus	ENSMAUP00000003426	98.1132	97.1698
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	mus_musculus	ENSMUSP00000108837	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	mus_pahari	MGP_PahariEiJ_P0082509	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	rattus_norvegicus	ENSRNOP00000048003	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	cavia_porcellus	ENSCPOP00000000484	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	heterocephalus_glaber_female	ENSHGLP00000046367	73.6111	72.9167
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	ursus_maritimus	ENSUMAP00000016515	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	bos_grunniens	ENSBGRP00000031549	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	microcebus_murinus	ENSMICP00000048240	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	99.0566	98.1132	microcebus_murinus	ENSMICP00000046612	99.0566	98.1132
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	96.2264	90.566	otolemur_garnettii	ENSOGAP00000018298	96.2264	90.566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	chinchilla_lanigera	ENSCLAP00000020197	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	monodon_monoceros	ENSMMNP00015017441	80.303	79.5455
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	99.0566	95.283	sorex_araneus	ENSSARP00000001952	99.0566	95.283
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	phocoena_sinus	ENSPSNP00000027536	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	89.6226	88.6792	ictidomys_tridecemlineatus	ENSSTOP00000024588	96.9388	95.9184
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	sciurus_vulgaris	ENSSVLP00005022751	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	97.1698	93.3962	myotis_lucifugus	ENSMLUP00000012638	97.1698	93.3962
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	chlorocebus_sabaeus	ENSCSAP00000011362	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	rhinopithecus_bieti	ENSRBIP00000012464	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	cervus_hanglu_yarkandensis	ENSCHYP00000007866	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	propithecus_coquereli	ENSPCOP00000016777	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	rhinopithecus_roxellana	ENSRROP00000003448	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	rhinopithecus_roxellana	ENSRROP00000001506	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	rhinopithecus_roxellana	ENSRROP00000007728	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	pteropus_vampyrus	ENSPVAP00000012712	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	prolemur_simus	ENSPSMP00000026572	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	93.3962	93.3962	cebus_imitator	ENSCCAP00000014949	100	100
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	carlito_syrichta	ENSTSYP00000021948	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	nannospalax_galili	ENSNGAP00000023330	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	nannospalax_galili	ENSNGAP00000011258	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	canis_lupus_dingo	ENSCAFP00020009120	74.6479	73.9437
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	100	99.0566	microtus_ochrogaster	ENSMOCP00000003099	100	99.0566
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	96.2264	90.566	callorhinchus_milii	ENSCMIP00000004264	67.5497	63.5762
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	52.8302	45.283	astyanax_mexicanus	ENSAMXP00000027880	80	68.5714
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	95.283	91.5094	poecilia_reticulata	ENSPREP00000018725	71.1268	68.3099
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	99.0566	98.1132	oryzias_latipes	ENSORLP00000030741	61.4035	60.8187
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	99.0566	95.283	xenopus_tropicalis	ENSXETP00000111246	99.0566	95.283
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	99.0566	95.283	sphenodon_punctatus	ENSSPUP00000022774	100	96.1905
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	53.7736	47.1698	anolis_carolinensis	ENSACAP00000024226	68.6747	60.241
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	99.0566	97.1698	geospiza_fortis	ENSGFOP00000003384	100	98.0952
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	63.2075	58.4906	labrus_bergylta	ENSLBEP00000005280	49.6296	45.9259
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	82.0755	78.3019	podarcis_muralis	ENSPMRP00000017654	53.3742	50.9202
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	97.1698	94.3396	amphiprion_ocellaris	ENSAOCP00000015454	88.7931	86.2069
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	99.0566	97.1698	anser_brachyrhynchus	ENSABRP00000000761	100	98.0952
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	98.1132	95.283	hippocampus_comes	ENSHCOP00000021191	98.1132	95.283
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	98.1132	95.283	amphiprion_percula	ENSAPEP00000006826	98.1132	95.283
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	98.1132	96.2264	stegastes_partitus	ENSSPAP00000013755	67.0968	65.8064
ENSNVIG00000007736	neovison_vison	ENSNVIP00000009778	96.2264	90.566	leptobrachium_leishanense	ENSLLEP00000027703	77.2727	72.7273

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression