RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSNPEG00000015347	Gene ID	112951550	Accession	-
Symbol		Alias	-	Full Name	transforming growth factor beta regulator 4
Status	Confidence	Length	10255 bases	Strand	Plus strand
Position	PTEW01000358.1 : 58484 - 68738	RNA binding domain	RAP , FAST_2 , FAST_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSNPEP00000020631	RAP	PF08373	3.3e-08	1
ENSNPEP00000020631	FAST_2	PF08368	5.1e-18	2
ENSNPEP00000020631	FAST_1	PF06743	4.7e-27	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSNPET00000021169	1776	591aa	ENSNPEP00000020631

Gene Model

Click here to download ENSNPEG00000015347's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSNPEG00000015347's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNPEG00000015347

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNPEG00000015347

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression