RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSNPEG00000014280	Gene ID	112957653	Accession	-
Symbol		Alias	-	Full Name	trinucleotide repeat containing adaptor 6C
Status	Confidence	Length	54471 bases	Strand	Plus strand
Position	PTEW01000076.1 : 1742109 - 1796579	RNA binding domain	TNRC6-PABC_bdg , Ago_hook
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSNPEP00000019164	TNRC6-PABC_bdg	PF16608	6.3e-129	1
ENSNPEP00000019164	Ago_hook	PF10427	5.9e-20	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSNPET00000019659	5784	1927aa	ENSNPEP00000019164

Gene Model

Click here to download ENSNPEG00000014280's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSNPEG00000014280's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNPEG00000014280

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNPEG00000014280

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression