RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSNPEG00000006057	Gene ID	112958001	Accession	-
Symbol		Alias	-	Full Name	egl-9 family hypoxia inducible factor 3
Status	Confidence	Length	4715 bases	Strand	Minus strand
Position	PTEW01000009.1 : 6564741 - 6569455	RNA binding domain	2OG-FeII_Oxy
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSNPEP00000008073	2OG-FeII_Oxy	PF03171	7e-05	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSNPET00000008277	366	121aa	ENSNPEP00000008073

Gene Model

Click here to download ENSNPEG00000006057's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSNPEG00000006057's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNPEG00000006057

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNPEG00000006057

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression