Description

Ensembl ID ENSNPEG00000002644 Gene ID 112946882 Accession -
Symbol Alias - Full Name UPF1 RNA helicase and ATPase
Status Confidence Length 15709 bases Strand Minus strand
Position PTEW01000219.1 : 1063251 - 1078959 RNA binding domain ResIII , UPF1_1B_dom , UPF1_Zn_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSNPEP00000004096 ResIII PF04851 1.9e-05 1
ENSNPEP00000004096 UPF1_1B_dom PF18141 9.3e-33 2
ENSNPEP00000004096 UPF1_Zn_bind PF09416 1.9e-62 3
ENSNPEP00000004095 ResIII PF04851 1.9e-05 1
ENSNPEP00000004095 UPF1_1B_dom PF18141 9.3e-33 2
ENSNPEP00000004095 UPF1_Zn_bind PF09416 1.9e-62 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSNPET00000004191 3387 1128aa ENSNPEP00000004095
- ENSNPET00000004192 3381 1126aa ENSNPEP00000004096

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSNPEG00000002644

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSNPEG00000002644

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression