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RBP World!
Description
Ensembl ID | ENSNNAG00000007079 | Gene ID | Accession | - | |
Symbol | Alias | - | Full Name | NA | |
Status | Confidence | Length | 7317 bases | Strand | Minus strand |
Position | 7 : 24266322 - 24273638 | RNA binding domain | Nop25 | ||
Summary | N.A. |
RNA binding domains (RBDs)
Protein | Domain | Pfam ID | E-value | Domain number |
---|---|---|---|---|
ENSNNAP00000010606 | Nop25 | PF09805 | 3.7e-17 | 1 |
RNA binding proteomes (RBPomes)
Pubmed ID | Full Name | Cell | Author | Time | Doi |
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Literatures on RNA binding capacity
Pubmed ID | Title | Author | Time | Journal |
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Transcripts
Name | Transcript ID | bp | Protein | Translation ID |
---|---|---|---|---|
- | ENSNNAT00000011089 | 801 | 145aa | ENSNNAP00000010601 |
- | ENSNNAT00000011094 | 651 | 139aa | ENSNNAP00000010606 |
Phenotypes
ensgID | Trait | pValue | Pubmed ID |
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GWAS
ensgID | SNP | Chromosome | Position | Trait | PubmedID | Or or BEAT | EFO ID |
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Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID | Source | Target | ||||||
---|---|---|---|---|---|---|---|---|
Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
ENSNNAG00000007079 |
Orthologs
Ensembl ID | Source | Target | ||||||
---|---|---|---|---|---|---|---|---|
Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
ENSNNAG00000007079 | naja_naja | ENSNNAP00000010601 | 44.8276 | 31.7241 | canis_lupus_familiaris | ENSCAFP00845042475 | 31.5534 | 22.3301 |
ENSNNAG00000007079 | naja_naja | ENSNNAP00000010601 | 44.1379 | 30.3448 | vulpes_vulpes | ENSVVUP00000023879 | 32.8205 | 22.5641 |
ENSNNAG00000007079 | naja_naja | ENSNNAP00000010601 | 47.5862 | 30.3448 | ursus_americanus | ENSUAMP00000004550 | 33.1731 | 21.1538 |
ENSNNAG00000007079 | naja_naja | ENSNNAP00000010601 | 75.1724 | 60.6897 | geospiza_fortis | ENSGFOP00000013388 | 44.1296 | 35.6275 |
ENSNNAG00000007079 | naja_naja | ENSNNAP00000010601 | 50.3448 | 32.4138 | canis_lupus_dingo | ENSCAFP00020027264 | 34.434 | 22.1698 |
ENSNNAG00000007079 | naja_naja | ENSNNAP00000010601 | 65.5172 | 44.8276 | sinocyclocheilus_grahami | ENSSGRP00000082835 | 48.2234 | 32.9949 |
Gene Ontology
Go ID | Go term | No. evidence | Entries | Species | Category |
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