Description

Ensembl ID ENSNMEG00000011476 Gene ID 110387339 Accession -
Symbol Alias - Full Name poly(A) binding protein cytoplasmic 4
Status Confidence Length 11233 bases Strand Minus strand
Position 22 : 5666802 - 5678034 RNA binding domain PABP , RRM_5 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSNMEP00000012870 PABP PF00658 6.9e-31 1
ENSNMEP00000012870 RRM_5 PF13893 6.1e-09 2
ENSNMEP00000012870 RRM_1 PF00076 9.7e-92 3
ENSNMEP00000012870 RRM_1 PF00076 9.7e-92 4
ENSNMEP00000012870 RRM_1 PF00076 9.7e-92 5
ENSNMEP00000012870 RRM_1 PF00076 9.7e-92 6
ENSNMEP00000012861 PABP PF00658 6.9e-31 1
ENSNMEP00000012861 RRM_5 PF13893 6.2e-09 2
ENSNMEP00000012861 RRM_1 PF00076 9.9e-92 3
ENSNMEP00000012861 RRM_1 PF00076 9.9e-92 4
ENSNMEP00000012861 RRM_1 PF00076 9.9e-92 5
ENSNMEP00000012861 RRM_1 PF00076 9.9e-92 6
ENSNMEP00000012855 PABP PF00658 7.5e-31 1
ENSNMEP00000012855 RRM_5 PF13893 8.1e-09 2
ENSNMEP00000012855 RRM_1 PF00076 1.3e-91 3
ENSNMEP00000012855 RRM_1 PF00076 1.3e-91 4
ENSNMEP00000012855 RRM_1 PF00076 1.3e-91 5
ENSNMEP00000012855 RRM_1 PF00076 1.3e-91 6
ENSNMEP00000012742 PABP PF00658 7.6e-31 1
ENSNMEP00000012742 RRM_5 PF13893 3.9e-06 2
ENSNMEP00000012742 RRM_1 PF00076 8e-86 3
ENSNMEP00000012742 RRM_1 PF00076 8e-86 4
ENSNMEP00000012742 RRM_1 PF00076 8e-86 5
ENSNMEP00000012742 RRM_1 PF00076 8e-86 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSNMET00000019644 1854 617aa ENSNMEP00000012742
- ENSNMET00000019786 1845 614aa ENSNMEP00000012855
- ENSNMET00000019792 1764 587aa ENSNMEP00000012861
- ENSNMET00000019801 1755 584aa ENSNMEP00000012870

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSNMEG00000011476

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSNMEG00000011476

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression