RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSNMEG00000011366 | Gene ID |
110397591 |
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
5'-3' exoribonuclease 1 |
Status |
Confidence |
Length |
34277 bases |
Strand |
Minus strand |
Position |
4 : 12765988 - 12800264 |
RNA binding domain |
SH3_12 , XRN_N , XRN1_D1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSNMEP00000013800 |
SH3_12 |
PF18129 |
8.1e-20 |
1 |
ENSNMEP00000013800 |
XRN_N |
PF03159 |
5.1e-94 |
2 |
ENSNMEP00000013800 |
XRN1_D1 |
PF18332 |
5.3e-32 |
3 |
ENSNMEP00000013802 |
SH3_12 |
PF18129 |
8.2e-20 |
1 |
ENSNMEP00000013802 |
XRN_N |
PF03159 |
5.2e-94 |
2 |
ENSNMEP00000013802 |
XRN1_D1 |
PF18332 |
5e-32 |
3 |
ENSNMEP00000013799 |
SH3_12 |
PF18129 |
8.3e-20 |
1 |
ENSNMEP00000013799 |
XRN_N |
PF03159 |
5.8e-94 |
2 |
ENSNMEP00000013799 |
XRN1_D1 |
PF18332 |
5.6e-32 |
3 |
ENSNMEP00000013798 |
SH3_12 |
PF18129 |
8.6e-20 |
1 |
ENSNMEP00000013798 |
XRN_N |
PF03159 |
5e-94 |
2 |
ENSNMEP00000013798 |
XRN1_D1 |
PF18332 |
1.2e-31 |
3 |
ENSNMEP00000013805 |
XRN_N |
PF03159 |
5.4e-94 |
1 |
ENSNMEP00000013805 |
XRN1_D1 |
PF18332 |
3.3e-06 |
2 |
ENSNMEP00000013820 |
XRN1_D1 |
PF18332 |
1.4e-28 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSNMET00000020974 |
5073 |
1690aa |
ENSNMEP00000013798 |
- |
ENSNMET00000020975 |
5016 |
1671aa |
ENSNMEP00000013799 |
- |
ENSNMET00000020976 |
4902 |
1633aa |
ENSNMEP00000013800 |
- |
ENSNMET00000020978 |
4887 |
1628aa |
ENSNMEP00000013802 |
- |
ENSNMET00000020981 |
2901 |
966aa |
ENSNMEP00000013805 |
- |
ENSNMET00000020996 |
1308 |
435aa |
ENSNMEP00000013820 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSNMEG00000011366 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSNMEG00000011366 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |