Description

Ensembl ID ENSNMEG00000011366 Gene ID 110397591 Accession -
Symbol Alias - Full Name 5'-3' exoribonuclease 1
Status Confidence Length 34277 bases Strand Minus strand
Position 4 : 12765988 - 12800264 RNA binding domain SH3_12 , XRN_N , XRN1_D1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSNMEP00000013800 SH3_12 PF18129 8.1e-20 1
ENSNMEP00000013800 XRN_N PF03159 5.1e-94 2
ENSNMEP00000013800 XRN1_D1 PF18332 5.3e-32 3
ENSNMEP00000013802 SH3_12 PF18129 8.2e-20 1
ENSNMEP00000013802 XRN_N PF03159 5.2e-94 2
ENSNMEP00000013802 XRN1_D1 PF18332 5e-32 3
ENSNMEP00000013799 SH3_12 PF18129 8.3e-20 1
ENSNMEP00000013799 XRN_N PF03159 5.8e-94 2
ENSNMEP00000013799 XRN1_D1 PF18332 5.6e-32 3
ENSNMEP00000013798 SH3_12 PF18129 8.6e-20 1
ENSNMEP00000013798 XRN_N PF03159 5e-94 2
ENSNMEP00000013798 XRN1_D1 PF18332 1.2e-31 3
ENSNMEP00000013805 XRN_N PF03159 5.4e-94 1
ENSNMEP00000013805 XRN1_D1 PF18332 3.3e-06 2
ENSNMEP00000013820 XRN1_D1 PF18332 1.4e-28 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSNMET00000020974 5073 1690aa ENSNMEP00000013798
- ENSNMET00000020975 5016 1671aa ENSNMEP00000013799
- ENSNMET00000020976 4902 1633aa ENSNMEP00000013800
- ENSNMET00000020978 4887 1628aa ENSNMEP00000013802
- ENSNMET00000020981 2901 966aa ENSNMEP00000013805
- ENSNMET00000020996 1308 435aa ENSNMEP00000013820

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSNMEG00000011366

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSNMEG00000011366

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression