RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSNGAG00000014156	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	432 bases	Strand	Plus strand
Position	KL204137.1 : 114273 - 114704	RNA binding domain	eIF-1a
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSNGAP00000012225	eIF-1a	PF01176	5.7e-11	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSNGAT00000017781	345	114aa	ENSNGAP00000012225

Gene Model

Click here to download ENSNGAG00000014156's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSNGAG00000014156's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000007090	67.4603	61.9048	nannospalax_galili	ENSNGAP00000012225	74.5614	68.4211
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000018399	75	72.2222	nannospalax_galili	ENSNGAP00000012225	94.7368	91.2281
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000016155	75	71.5278	nannospalax_galili	ENSNGAP00000012225	94.7368	90.3509
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000013542	73.0435	70.4348	nannospalax_galili	ENSNGAP00000012225	73.6842	71.0526

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.1053	86.8421	sarcophilus_harrisii	ENSSHAP00000044325	63.253	59.6386
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	51.7544	50.8772	notamacropus_eugenii	ENSMEUP00000009788	43.0657	42.3358
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	87.7193	80.7018	echinops_telfairi	ENSETEP00000016320	70.4225	64.7887
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	91.2281	85.9649	echinops_telfairi	ENSETEP00000001498	73.2394	69.0141
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.1053	86.8421	cercocebus_atys	ENSCATP00000019192	63.253	59.6386
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	89.4737	85.0877	macaca_fascicularis	ENSMFAP00000045597	56.9832	54.1899
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	89.4737	83.3333	macaca_fascicularis	ENSMFAP00000060093	85.7143	79.8319
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	78.0702	74.5614	macaca_nemestrina	ENSMNEP00000023329	60.5442	57.8231
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.1053	86.8421	mandrillus_leucophaeus	ENSMLEP00000014768	63.253	59.6386
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	91.2281	86.8421	pan_paniscus	ENSPPAP00000021708	63.8037	60.7362
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	91.2281	86.8421	pongo_abelii	ENSPPYP00000042595	56.5217	53.8043
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	71.0526	67.5439	pan_troglodytes	ENSPTRP00000037252	65.3226	62.0968
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	94.7368	91.2281	homo_sapiens	ENSP00000368927	75	72.2222
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	91.2281	86.8421	mustela_putorius_furo	ENSMPUP00000003305	73.2394	69.7183
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	94.7368	91.2281	felis_catus	ENSFCAP00000040516	75	72.2222
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	65.7895	64.0351	procavia_capensis	ENSPCAP00000008533	54.3478	52.8986
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	93.8596	89.4737	oryctolagus_cuniculus	ENSOCUP00000008779	74.3056	70.8333
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	90.3509	86.8421	dipodomys_ordii	ENSDORP00000010840	74.6377	71.7391
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	71.0526	67.5439	cricetulus_griseus_chok1gshd	ENSCGRP00001010160	74.3119	70.6422
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.1053	86.8421	rattus_norvegicus	ENSRNOP00000089364	71.9178	67.8082
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	65.7895	60.5263	octodon_degus	ENSODEP00000024403	68.1818	62.7273
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.1053	87.7193	heterocephalus_glaber_female	ENSHGLP00000037944	72.9167	69.4444
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	88.5965	84.2105	heterocephalus_glaber_female	ENSHGLP00000043386	72.6619	69.0648
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	57.8947	54.386	cavia_porcellus	ENSCPOP00000024068	51.1628	48.062
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	93.8596	90.3509	ursus_maritimus	ENSUMAP00000026610	74.3056	71.5278
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	85.0877	78.9474	monodelphis_domestica	ENSMODP00000035786	79.5082	73.7705
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	89.4737	85.9649	vicugna_pacos	ENSVPAP00000009238	74.4526	71.5328
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.1053	87.7193	microcebus_murinus	ENSMICP00000003745	66.4557	63.2911
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	86.8421	82.4561	tupaia_belangeri	ENSTBEP00000015221	71.7391	68.1159
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.9825	87.7193	ictidomys_tridecemlineatus	ENSSTOP00000023869	58.8889	55.5556
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	91.2281	87.7193	phocoena_sinus	ENSPSNP00000030019	68.4211	65.7895
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	94.7368	90.3509	sciurus_vulgaris	ENSSVLP00005032802	75	71.5278
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	91.2281	86.8421	rhinopithecus_roxellana	ENSRROP00000038512	57.7778	55
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	78.0702	74.5614	nomascus_leucogenys	ENSNLEP00000012082	54.9383	52.4691
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	88.5965	84.2105	rhinopithecus_bieti	ENSRBIP00000009037	66.8874	63.5762
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	91.2281	85.0877	moschus_moschiferus	ENSMMSP00000004259	89.6552	83.6207
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	94.7368	91.2281	canis_lupus_dingo	ENSCAFP00020005630	75	72.2222
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	90.3509	86.8421	neovison_vison	ENSNVIP00000002378	74.6377	71.7391
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	75.4386	62.2807	caenorhabditis_elegans	H06H21.3.1	39.8148	32.8704
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	83.3333	71.0526	drosophila_melanogaster	FBpp0310418	64.1892	54.7297
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	84.2105	70.1754	ciona_intestinalis	ENSCINP00000012877	51.0638	42.5532
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.1053	87.7193	callorhinchus_milii	ENSCMIP00000025201	62.1302	59.1716
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	90.3509	85.9649	gadus_morhua	ENSGMOP00000033070	52.551	50
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	90.3509	85.9649	cyclopterus_lumpus	ENSCLMP00005050055	62.0482	59.0361
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	75.4386	67.5439	parus_major	ENSPMJP00000014883	30.4965	27.305
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	66.6667	54.386	anolis_carolinensis	ENSACAP00000031409	63.8655	52.1008
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	85.9649	74.5614	takifugu_rubripes	ENSTRUP00000086562	57.9882	50.2959
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	71.0526	57.0175	ciona_savignyi	ENSCSAVP00000008325	55.4795	44.5205
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.1053	83.3333	scophthalmus_maximus	ENSSMAP00000016056	62.8743	56.8862
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.1053	85.9649	cottoperca_gobio	ENSCGOP00000014670	67.3077	62.8205
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	90.3509	85.9649	ficedula_albicollis	ENSFALP00000029392	74.6377	71.0145
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	71.9298	68.4211	podarcis_muralis	ENSPMRP00000014574	75.9259	72.2222
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	87.7193	78.9474	tetraodon_nigroviridis	ENSTNIP00000007207	69.9301	62.9371
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	90.3509	86.8421	nothobranchius_furzeri	ENSNFUP00015047039	54.2105	52.1053
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	48.2456	42.9825	oryzias_sinensis	ENSOSIP00000019435	51.4019	45.7944
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	91.2281	85.0877	larimichthys_crocea	ENSLCRP00005036506	71.7241	66.8966
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.9825	85.9649	myripristis_murdjan	ENSMMDP00005030493	71.1409	65.7718
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	92.1053	85.9649	denticeps_clupeoides	ENSDCDP00000000562	48.3871	45.1613
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	82.4561	76.3158	cynoglossus_semilaevis	ENSCSEP00000024013	65.2778	60.4167
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	75.4386	59.6491	saccharomyces_cerevisiae	YMR260C	56.2092	44.4444
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	68.4211	66.6667	leptobrachium_leishanense	ENSLLEP00000017162	65.5462	63.8655
ENSNGAG00000014156	nannospalax_galili	ENSNGAP00000012225	94.7368	91.2281	paramormyrops_kingsleyae	ENSPKIP00000000368	75	72.2222

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression