RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSNGAG00000010369	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	72416 bases	Strand	Plus strand
Position	KL201815.1 : 372554 - 444969	RNA binding domain	tRNA-synt_1b
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSNGAP00000007020	tRNA-synt_1b	PF00579	1.4e-10	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSNGAT00000012472	255	85aa	ENSNGAP00000007020

Gene Model

Click here to download ENSNGAG00000010369's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSNGAG00000010369's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNGAG00000010369

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSNGAG00000010369	nannospalax_galili	ENSNGAP00000007020	87.0588	82.3529	mus_caroli	MGP_CAROLIEiJ_P0059466	69.8113	66.0377
ENSNGAG00000010369	nannospalax_galili	ENSNGAP00000007020	42.3529	35.2941	oryzias_sinensis	ENSOSIP00000002510	64.2857	53.5714

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression