| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSNFUG00015006653 | Gene ID |
|
Accession |
- |
| Symbol |
zgc |
Alias |
- |
Full Name |
zgc:163098 |
| Status |
Confidence |
Length |
10118 bases |
Strand |
Plus strand |
| Position |
sgr11 : 15590269 - 15600386 |
RNA binding domain |
RRM_1 , Surp , cwf21 , CID |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSNFUP00015013587 |
RRM_1 |
PF00076 |
1.1e-08 |
1 |
| ENSNFUP00015013587 |
Surp |
PF01805 |
3.6e-05 |
2 |
| ENSNFUP00015013575 |
RRM_1 |
PF00076 |
3.4e-08 |
1 |
| ENSNFUP00015013575 |
Surp |
PF01805 |
4.6e-14 |
2 |
| ENSNFUP00015013575 |
cwf21 |
PF08312 |
3.7e-10 |
3 |
| ENSNFUP00015013575 |
CID |
PF04818 |
5.4e-09 |
4 |
| ENSNFUP00015013581 |
RRM_1 |
PF00076 |
2.4e-07 |
1 |
| ENSNFUP00015013581 |
Surp |
PF01805 |
3e-14 |
2 |
| ENSNFUP00015013581 |
cwf21 |
PF08312 |
3.6e-10 |
3 |
| ENSNFUP00015013581 |
CID |
PF04818 |
6.9e-09 |
4 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| zgc:163098-201 |
ENSNFUT00015014260 |
2523 |
817aa |
ENSNFUP00015013575 |
| zgc:163098-202 |
ENSNFUT00015014266 |
2208 |
712aa |
ENSNFUP00015013581 |
| zgc:163098-203 |
ENSNFUT00015014272 |
1179 |
369aa |
ENSNFUP00015013587 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015022250 | 59.5657 | 47.363 | nothobranchius_furzeri | ENSNFUP00015013575 | 70.5018 | 56.0588 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 86.6585 | 77.8458 | fundulus_heteroclitus | ENSFHEP00000029468 | 81.6609 | 73.3564 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 86.7809 | 78.3354 | poecilia_reticulata | ENSPREP00000034057 | 80.5682 | 72.7273 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 87.2705 | 79.1922 | oryzias_latipes | ENSORLP00000035930 | 82.8107 | 75.1452 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 86.6585 | 78.3354 | xiphophorus_maculatus | ENSXMAP00000012704 | 81.5668 | 73.7327 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 85.9241 | 78.5802 | haplochromis_burtoni | ENSHBUP00000020361 | 80.597 | 73.7084 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 77.4786 | 69.4002 | cyclopterus_lumpus | ENSCLMP00005027262 | 81.0499 | 72.5992 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 84.9449 | 77.9682 | lates_calcarifer | ENSLCAP00010012856 | 81.5511 | 74.8531 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 82.8641 | 74.0514 | oreochromis_niloticus | ENSONIP00000006612 | 73.7473 | 65.9041 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 86.1689 | 78.0906 | dicentrarchus_labrax | ENSDLAP00005003661 | 78.2222 | 70.8889 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 85.1897 | 76.0098 | sparus_aurata | ENSSAUP00010064398 | 75.3247 | 67.2078 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 86.5361 | 79.0698 | oryzias_melastigma | ENSOMEP00000022550 | 82.0186 | 74.942 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 86.1689 | 77.9682 | cyprinodon_variegatus | ENSCVAP00000026639 | 81.1995 | 73.4717 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 85.5569 | 78.0906 | astatotilapia_calliptera | ENSACLP00000024533 | 80.2526 | 73.2491 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 87.1481 | 79.3146 | seriola_dumerili | ENSSDUP00000013672 | 80 | 72.809 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 87.0257 | 78.7026 | poecilia_latipinna | ENSPLAP00000006168 | 81.9124 | 74.0783 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 81.7625 | 72.5826 | scophthalmus_maximus | ENSSMAP00000022102 | 75.31 | 66.8546 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 77.4786 | 69.4002 | amphilophus_citrinellus | ENSACIP00000015457 | 79.0262 | 70.7865 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 81.3953 | 73.4394 | cottoperca_gobio | ENSCGOP00000046017 | 79.6407 | 71.8563 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 86.7809 | 78.4578 | poecilia_formosa | ENSPFOP00000012080 | 81.682 | 73.8479 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 69.5226 | 62.0563 | labrus_bergylta | ENSLBEP00000003348 | 71.3568 | 63.6935 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 83.4761 | 74.7858 | anabas_testudineus | ENSATEP00000023959 | 82.6667 | 74.0606 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 81.5177 | 72.5826 | gasterosteus_aculeatus | ENSGACP00000027383 | 71.69 | 63.8321 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 83.4761 | 76.0098 | oryzias_sinensis | ENSOSIP00000051947 | 84.5105 | 76.9517 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 87.1481 | 79.8042 | stegastes_partitus | ENSSPAP00000001174 | 81.1859 | 74.3444 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 87.0257 | 79.1922 | amphiprion_percula | ENSAPEP00000001887 | 80.521 | 73.2729 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 87.1481 | 79.3146 | amphiprion_ocellaris | ENSAOCP00000004983 | 80.6342 | 73.3862 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 82.7417 | 72.5826 | cynoglossus_semilaevis | ENSCSEP00000031428 | 76.644 | 67.2336 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 85.6793 | 78.213 | pundamilia_nyererei | ENSPNYP00000021869 | 80.3674 | 73.364 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 38.3109 | 33.1701 | hippocampus_comes | ENSHCOP00000017777 | 80.4627 | 69.6658 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 83.4761 | 75.5202 | mastacembelus_armatus | ENSMAMP00000025339 | 79.3946 | 71.8277 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 39.6573 | 35.7405 | larimichthys_crocea | ENSLCRP00005037017 | 89.2562 | 80.4408 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 86.9033 | 79.3146 | acanthochromis_polyacanthus | ENSAPOP00000004005 | 80.4077 | 73.3862 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 68.2987 | 60.8323 | sander_lucioperca | ENSSLUP00000039540 | 75.5074 | 67.253 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 87.1481 | 79.437 | seriola_lalandi_dorsalis | ENSSLDP00000026238 | 80.1802 | 73.0856 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 85.5569 | 78.0906 | maylandia_zebra | ENSMZEP00005022441 | 80.2526 | 73.2491 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 84.4553 | 76.8666 | neolamprologus_brichardi | ENSNBRP00000027847 | 82.1429 | 74.7619 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 33.9045 | 30.967 | betta_splendens | ENSBSLP00000042407 | 92.3333 | 84.3333 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 84.7001 | 77.1114 | kryptolebias_marmoratus | ENSKMAP00000013038 | 80.4651 | 73.2558 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 47.7356 | 30.8446 | caenorhabditis_elegans | C07H6.4.1 | 41.8006 | 27.0096 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 57.4051 | 41.1261 | drosophila_melanogaster | FBpp0071455 | 49.0073 | 35.1097 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 60.4651 | 45.8996 | ciona_intestinalis | ENSCINP00000033725 | 57.2422 | 43.4531 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 50.0612 | 40.2693 | eptatretus_burgeri | ENSEBUP00000005144 | 49.5758 | 39.8788 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 58.9963 | 48.1028 | callorhinchus_milii | ENSCMIP00000017787 | 64.9596 | 52.965 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 70.5018 | 58.7515 | latimeria_chalumnae | ENSLACP00000009563 | 60.4407 | 50.3673 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 72.9498 | 60.9547 | lepisosteus_oculatus | ENSLOCP00000016774 | 62.803 | 52.4763 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 79.437 | 66.4627 | clupea_harengus | ENSCHAP00000057100 | 70.3142 | 58.8299 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 78.0906 | 64.0147 | danio_rerio | ENSDARP00000101139 | 72.9977 | 59.8398 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 71.6034 | 58.5067 | astyanax_mexicanus | ENSAMXP00000005209 | 71.6034 | 58.5067 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 77.4786 | 63.6475 | carassius_auratus | ENSCARP00000049276 | 73.0104 | 59.9769 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 75.5202 | 63.0355 | carassius_auratus | ENSCARP00000023931 | 70.8381 | 59.1274 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 76.1322 | 62.7907 | ictalurus_punctatus | ENSIPUP00000029131 | 71.7416 | 59.1696 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 74.4186 | 61.8115 | electrophorus_electricus | ENSEEEP00000014477 | 71.9527 | 59.7633 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 79.1922 | 67.4419 | esox_lucius | ENSELUP00000038141 | 72.7784 | 61.9798 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 78.825 | 67.5643 | oncorhynchus_kisutch | ENSOKIP00005115643 | 70.614 | 60.5263 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 79.5594 | 67.8091 | oncorhynchus_kisutch | ENSOKIP00005063636 | 67.9206 | 57.8892 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 79.1922 | 68.0539 | salmo_salar | ENSSSAP00000081304 | 72.615 | 62.4018 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 77.7234 | 66.4627 | salmo_salar | ENSSSAP00000056723 | 70.3991 | 60.1996 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 79.5594 | 67.6867 | oncorhynchus_mykiss | ENSOMYP00000027806 | 68.1342 | 57.9665 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 79.1922 | 68.0539 | oncorhynchus_mykiss | ENSOMYP00000138303 | 67.8197 | 58.2809 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 79.6818 | 67.8091 | salmo_trutta | ENSSTUP00000069875 | 69.403 | 59.0618 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 79.0698 | 67.9315 | salmo_trutta | ENSSTUP00000100926 | 76.1792 | 65.4481 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 78.3354 | 67.1971 | gadus_morhua | ENSGMOP00000000984 | 79.5031 | 68.1988 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 75.2754 | 62.6683 | erpetoichthys_calabaricus | ENSECRP00000016079 | 67.9558 | 56.5746 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 73.6842 | 62.0563 | pygocentrus_nattereri | ENSPNAP00000017465 | 69.8376 | 58.8167 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 60.9547 | 46.1444 | ciona_savignyi | ENSCSAVP00000015403 | 57.3733 | 43.4332 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 79.437 | 67.9315 | hucho_hucho | ENSHHUP00000008746 | 72.1913 | 61.7353 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 71.2362 | 60.8323 | hucho_hucho | ENSHHUP00000058415 | 72.119 | 61.5861 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 79.5594 | 67.8091 | oncorhynchus_tshawytscha | ENSOTSP00005072785 | 67.9206 | 57.8892 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 79.1922 | 67.8091 | oncorhynchus_tshawytscha | ENSOTSP00005009484 | 69.3462 | 59.3783 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 35.2509 | 30.2326 | sinocyclocheilus_grahami | ENSSGRP00000059348 | 79.1209 | 67.8571 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 37.0869 | 32.3133 | sinocyclocheilus_grahami | ENSSGRP00000067362 | 83.2418 | 72.5275 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 77.3562 | 66.5851 | paramormyrops_kingsleyae | ENSPKIP00000041361 | 71.0112 | 61.1236 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 77.2338 | 65.1163 | denticeps_clupeoides | ENSDCDP00000056836 | 73.2869 | 61.7886 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 77.2338 | 65.1163 | denticeps_clupeoides | ENSDCDP00000056600 | 73.2869 | 61.7886 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 76.0098 | 66.0955 | myripristis_murdjan | ENSMMDP00005006786 | 75.6395 | 65.7734 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 78.0906 | 66.7075 | scleropages_formosus | ENSSFOP00015007603 | 71.6854 | 61.236 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 78.3354 | 64.9939 | cyprinus_carpio_carpio | ENSCCRP00000178651 | 72.7273 | 60.3409 |
| ENSNFUG00015006653 | nothobranchius_furzeri | ENSNFUP00015013575 | 78.9474 | 65.2387 | cyprinus_carpio_carpio | ENSCCRP00000168636 | 73.5462 | 60.7754 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
