| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSNBRG00000000452 | Gene ID |
102786646 |
Accession |
- |
| Symbol |
tnrc6c2 |
Alias |
- |
Full Name |
trinucleotide repeat-containing gene 6C protein-like |
| Status |
Confidence |
Length |
14930 bases |
Strand |
Minus strand |
| Position |
JH422284.1 : 8485832 - 8500761 |
RNA binding domain |
TNRC6-PABC_bdg , Ago_hook |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSNBRP00000000606 |
TNRC6-PABC_bdg |
PF16608 |
6.1e-83 |
1 |
| ENSNBRP00000000606 |
TNRC6-PABC_bdg |
PF16608 |
6.1e-83 |
2 |
| ENSNBRP00000000606 |
Ago_hook |
PF10427 |
1.4e-06 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSNBRT00000000648 |
4527 |
1508aa |
ENSNBRP00000000606 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000008712 | 40.9836 | 31.7547 | neolamprologus_brichardi | ENSNBRP00000000606 | 44.7613 | 34.6817 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000006579 | 46.6855 | 33.9915 | neolamprologus_brichardi | ENSNBRP00000000606 | 21.9496 | 15.9814 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000003479 | 30.4371 | 22.7612 | neolamprologus_brichardi | ENSNBRP00000000606 | 37.8647 | 28.3156 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000006852 | 63.1138 | 55.5689 | neolamprologus_brichardi | ENSNBRP00000000606 | 69.8939 | 61.5385 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000017113 | 37.3522 | 20.331 | neolamprologus_brichardi | ENSNBRP00000000606 | 10.4775 | 5.70292 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000003643 | 40.081 | 19.0283 | neolamprologus_brichardi | ENSNBRP00000000606 | 6.56499 | 3.11671 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 91.5119 | 85.5438 | fundulus_heteroclitus | ENSFHEP00000003071 | 79.5848 | 74.3945 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 89.7215 | 84.6817 | poecilia_reticulata | ENSPREP00000023581 | 87.4596 | 82.5469 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 91.6446 | 86.4721 | xiphophorus_maculatus | ENSXMAP00000036125 | 84.9416 | 80.1475 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 90.4509 | 84.4828 | oryzias_latipes | ENSORLP00000030611 | 71.4885 | 66.7715 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 99.7347 | 99.5358 | haplochromis_burtoni | ENSHBUP00000032177 | 80.9037 | 80.7423 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 96.1538 | 95.2918 | oreochromis_niloticus | ENSONIP00000022830 | 83.0946 | 82.3496 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 99.8011 | 99.5358 | astatotilapia_calliptera | ENSACLP00000009463 | 81.0011 | 80.7858 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 91.8435 | 88.7268 | lates_calcarifer | ENSLCAP00010053575 | 79.4607 | 76.7642 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 85.0133 | 80.1724 | cyclopterus_lumpus | ENSCLMP00005013575 | 84.5646 | 79.7493 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 94.1645 | 90.252 | dicentrarchus_labrax | ENSDLAP00005006954 | 86.0606 | 82.4848 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 23.2095 | 22.0159 | cyprinodon_variegatus | ENSCVAP00000032338 | 90.2062 | 85.567 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 94.1645 | 89.5889 | sparus_aurata | ENSSAUP00010022754 | 86.2174 | 82.0279 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 91.1141 | 85.809 | oryzias_melastigma | ENSOMEP00000016317 | 71.7493 | 67.5718 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 87.5995 | 82.2944 | takifugu_rubripes | ENSTRUP00000066610 | 84.0331 | 78.944 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 92.5729 | 87.5995 | scophthalmus_maximus | ENSSMAP00000024793 | 84.7087 | 80.1578 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 99.8011 | 99.6021 | maylandia_zebra | ENSMZEP00005032067 | 81.0011 | 80.8396 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 88.0637 | 81.565 | gasterosteus_aculeatus | ENSGACP00000025645 | 74.7748 | 69.2568 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 96.7507 | 95.1591 | amphilophus_citrinellus | ENSACIP00000005922 | 96.3036 | 94.7195 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 89.5225 | 85.6101 | anabas_testudineus | ENSATEP00000070765 | 78.125 | 74.7106 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 89.6552 | 84.5491 | cynoglossus_semilaevis | ENSCSEP00000004558 | 87.5081 | 82.5243 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 99.6684 | 99.2706 | pundamilia_nyererei | ENSPNYP00000003303 | 91.9266 | 91.5596 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 91.313 | 86.87 | kryptolebias_marmoratus | ENSKMAP00000017975 | 87.0417 | 82.8066 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 22.3475 | 21.9496 | acanthochromis_polyacanthus | ENSAPOP00000013376 | 83.2099 | 81.7284 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 94.9602 | 91.5782 | seriola_dumerili | ENSSDUP00000028753 | 87.4771 | 84.3616 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 95.756 | 91.3793 | amphiprion_percula | ENSAPEP00000000615 | 90.8176 | 86.6667 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 87.5995 | 83.2228 | cottoperca_gobio | ENSCGOP00000010683 | 83.8198 | 79.632 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 92.2414 | 86.1406 | labrus_bergylta | ENSLBEP00000012112 | 72.9418 | 68.1175 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 90.5836 | 84.748 | oryzias_sinensis | ENSOSIP00000013063 | 71.5558 | 66.946 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 94.2308 | 89.9867 | mastacembelus_armatus | ENSMAMP00000002451 | 74.554 | 71.1962 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 96.0212 | 92.7056 | stegastes_partitus | ENSSPAP00000017308 | 76.5328 | 73.8901 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 84.8806 | 80.1061 | poecilia_formosa | ENSPFOP00000011791 | 78.3354 | 73.929 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 83.5544 | 78.4483 | tetraodon_nigroviridis | ENSTNIP00000006799 | 78.5047 | 73.7072 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 89.0584 | 84.2175 | poecilia_latipinna | ENSPLAP00000005120 | 85.9245 | 81.254 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 89.9204 | 86.2069 | sander_lucioperca | ENSSLUP00000059858 | 79.5775 | 76.2911 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 94.5623 | 90.5836 | larimichthys_crocea | ENSLCRP00005033294 | 74.4259 | 71.2944 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 94.7613 | 91.313 | seriola_lalandi_dorsalis | ENSSLDP00000002564 | 87.2938 | 84.1173 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 89.1247 | 83.2891 | hippocampus_comes | ENSHCOP00000026677 | 71.4894 | 66.8085 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 74.5358 | 69.3634 | oryzias_javanicus | ENSOJAP00000012038 | 69.1692 | 64.3692 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 95.756 | 91.3793 | amphiprion_ocellaris | ENSAOCP00000028185 | 76.3617 | 72.8715 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 83.687 | 78.7135 | nothobranchius_furzeri | ENSNFUP00015034042 | 75.0744 | 70.6127 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 92.3077 | 87.8647 | betta_splendens | ENSBSLP00000028731 | 80.1382 | 76.2809 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 72.878 | 61.4058 | danio_rerio | ENSDARP00000132648 | 68.2609 | 57.5155 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 72.1485 | 62.4005 | carassius_auratus | ENSCARP00000001748 | 63.3663 | 54.8049 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 72.2812 | 61.2732 | carassius_auratus | ENSCARP00000058283 | 68.5104 | 58.0767 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 71.9496 | 62.4005 | astyanax_mexicanus | ENSAMXP00000009848 | 71.3346 | 61.8672 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 66.1804 | 54.9735 | ictalurus_punctatus | ENSIPUP00000033885 | 67.1602 | 55.7873 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 12.7984 | 11.2069 | electrophorus_electricus | ENSEEEP00000012938 | 75.0973 | 65.7588 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 80.6366 | 73.8064 | esox_lucius | ENSELUP00000067667 | 66.3755 | 60.7533 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 80.1724 | 73.0769 | oncorhynchus_kisutch | ENSOKIP00005006372 | 61.3083 | 55.8824 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 80.2387 | 73.0769 | oncorhynchus_kisutch | ENSOKIP00005062386 | 59.1977 | 53.9139 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 80.3714 | 73.0769 | oncorhynchus_mykiss | ENSOMYP00000107930 | 59.911 | 54.4736 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 79.8409 | 72.878 | oncorhynchus_mykiss | ENSOMYP00000123845 | 60.1399 | 54.8951 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 80.0398 | 73.2095 | salmo_salar | ENSSSAP00000030509 | 59.9305 | 54.8163 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 75.6631 | 68.5013 | salmo_salar | ENSSSAP00000105150 | 73.329 | 66.3882 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 80.2387 | 73.3422 | salmo_trutta | ENSSTUP00000105512 | 60.0198 | 54.8611 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 79.9072 | 73.2095 | salmo_trutta | ENSSTUP00000040509 | 62.1134 | 56.9072 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 66.1141 | 57.5597 | gadus_morhua | ENSGMOP00000052835 | 49.5773 | 43.1626 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 71.6843 | 61.9363 | pygocentrus_nattereri | ENSPNAP00000020014 | 71.3061 | 61.6095 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 87.5332 | 83.4218 | myripristis_murdjan | ENSMMDP00005055322 | 87.1287 | 83.0363 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 79.443 | 72.5464 | hucho_hucho | ENSHHUP00000012037 | 73.905 | 67.4892 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 80.1061 | 73.0769 | hucho_hucho | ENSHHUP00000068866 | 60.9178 | 55.5724 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 75.6631 | 68.0371 | oncorhynchus_tshawytscha | ENSOTSP00005050930 | 62.3838 | 56.0962 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 73.4085 | 66.7772 | oncorhynchus_tshawytscha | ENSOTSP00005046225 | 67.5824 | 61.4774 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 72.4138 | 62.2679 | sinocyclocheilus_grahami | ENSSGRP00000039585 | 70.7254 | 60.8161 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 71.8833 | 61.5385 | sinocyclocheilus_grahami | ENSSGRP00000077270 | 65.5381 | 56.1064 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 73.6074 | 64.7878 | denticeps_clupeoides | ENSDCDP00000027435 | 66.0714 | 58.1548 |
| ENSNBRG00000000452 | neolamprologus_brichardi | ENSNBRP00000000606 | 72.679 | 62.7984 | cyprinus_carpio_carpio | ENSCCRP00000162133 | 73.262 | 63.3021 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
