RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMZEG00005003652	Gene ID	101478209	Accession	-
Symbol	PAIP2	Alias	-	Full Name	poly(A) binding protein interacting protein 2
Status	Confidence	Length	10740 bases	Strand	Minus strand
Position	LG2 : 8919576 - 8930315	RNA binding domain	PAM2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMZEP00005004703	PAM2	PF07145	4.2e-06	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMZET00005004908	1616	128aa	ENSMZEP00005004703
-	ENSMZET00005004915	2040	139aa	ENSMZEP00005004710

Gene Model

Click here to download ENSMZEG00005003652's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMZEG00005003652's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005005310	55.4745	43.7956	maylandia_zebra	ENSMZEP00005004710	54.6763	43.1655

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.1007	61.8705	fundulus_heteroclitus	ENSFHEP00000005117	78.626	65.6489
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.8201	63.3094	poecilia_reticulata	ENSPREP00000017496	78.7879	66.6667
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.8201	63.3094	xiphophorus_maculatus	ENSXMAP00000014127	78.7879	66.6667
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.1007	59.7122	oryzias_latipes	ENSORLP00000043080	60.2339	48.538
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	84.8921	82.7338	haplochromis_burtoni	ENSHBUP00000002771	92.1875	89.8438
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	84.8921	82.7338	astatotilapia_calliptera	ENSACLP00000023353	92.1875	89.8438
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	84.1727	80.5755	oreochromis_niloticus	ENSONIP00000075865	91.4062	87.5
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.1007	58.9928	sparus_aurata	ENSSAUP00010010028	78.0303	62.1212
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	79.8561	68.3453	lates_calcarifer	ENSLCAP00010008284	83.4586	71.4286
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	72.6619	62.5899	cyprinodon_variegatus	ENSCVAP00000004056	76.5152	65.9091
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	69.0648	55.3957	oryzias_melastigma	ENSOMEP00000035211	71.6418	57.4627
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	84.1727	82.0144	neolamprologus_brichardi	ENSNBRP00000017232	91.4062	89.0625
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	75.5396	64.7482	kryptolebias_marmoratus	ENSKMAP00000012836	59.322	50.8475
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	79.1367	68.3453	seriola_dumerili	ENSSDUP00000006956	83.9695	72.5191
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	72.6619	60.4317	scophthalmus_maximus	ENSSMAP00000009795	80.1587	66.6667
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.8201	63.3094	poecilia_formosa	ENSPFOP00000004270	78.7879	66.6667
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	64.7482	55.3957	cottoperca_gobio	ENSCGOP00000014801	79.646	68.1416
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	64.7482	55.3957	cottoperca_gobio	ENSCGOP00000048342	56.962	48.7342
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.1007	64.7482	anabas_testudineus	ENSATEP00000026861	81.1024	70.8661
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	76.259	62.5899	labrus_bergylta	ENSLBEP00000023747	80.916	66.4122
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	65.4676	51.0791	tetraodon_nigroviridis	ENSTNIP00000004217	72.2222	56.3492
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	68.3453	52.518	tetraodon_nigroviridis	ENSTNIP00000005741	76	58.4
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.8201	67.6259	acanthochromis_polyacanthus	ENSAPOP00000022829	83.871	75.8064
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	52.518	40.2878	hippocampus_comes	ENSHCOP00000024154	59.3496	45.5285
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	83.4532	79.8561	amphilophus_citrinellus	ENSACIP00000028957	90.625	86.7188
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	77.6978	70.5036	amphiprion_ocellaris	ENSAOCP00000031042	81.8182	74.2424
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	84.8921	82.7338	pundamilia_nyererei	ENSPNYP00000020918	92.1875	89.8438
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.8201	60.4317	oryzias_sinensis	ENSOSIP00000000634	78.1955	63.1579
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	59.7122	51.0791	gasterosteus_aculeatus	ENSGACP00000021555	69.7479	59.6639
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	63.3094	54.6763	sander_lucioperca	ENSSLUP00000020296	74.5763	64.4068
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	77.6978	70.5036	amphiprion_percula	ENSAPEP00000005266	81.8182	74.2424
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	64.0288	49.6403	cynoglossus_semilaevis	ENSCSEP00000003996	70.0787	54.3307
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	71.9424	60.4317	cynoglossus_semilaevis	ENSCSEP00000019898	74.0741	62.2222
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	78.4173	69.7842	stegastes_partitus	ENSSPAP00000012645	82.5758	73.4848
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.1007	66.187	seriola_lalandi_dorsalis	ENSSLDP00000007165	83.7398	74.7967
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.1007	60.4317	oryzias_javanicus	ENSOJAP00000045031	77.4436	63.1579
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	56.1151	48.2014	larimichthys_crocea	ENSLCRP00005001962	76.4706	65.6863
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	76.259	63.3094	nothobranchius_furzeri	ENSNFUP00015003259	78.5185	65.1852
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	79.8561	64.7482	mastacembelus_armatus	ENSMAMP00000020571	84.0909	68.1818
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	69.7842	58.9928	betta_splendens	ENSBSLP00000009993	70.2899	59.4203
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	74.8201	63.3094	poecilia_latipinna	ENSPLAP00000020800	78.7879	66.6667
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	40.2878	25.8993	drosophila_melanogaster	FBpp0082161	45.1613	29.0323
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	53.9568	39.5683	petromyzon_marinus	ENSPMAP00000003771	64.6552	47.4138
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	51.0791	43.1655	eptatretus_burgeri	ENSEBUP00000002612	46.7105	39.4737
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	66.9065	53.9568	gadus_morhua	ENSGMOP00000041580	70.9924	57.2519
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	76.9784	66.9065	myripristis_murdjan	ENSMMDP00005053502	82.3077	71.5385
ENSMZEG00005003652	maylandia_zebra	ENSMZEP00005004710	68.3453	53.2374	scleropages_formosus	ENSSFOP00015048098	69.3431	54.0146

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression