RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSMVIG00005005973 | Gene ID |
103759016 |
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
5'-3' exoribonuclease 1 |
Status |
Confidence |
Length |
30207 bases |
Strand |
Plus strand |
Position |
MCBO02000559.1 : 8848486 - 8878692 |
RNA binding domain |
SH3_12 , XRN_N , XRN1_D1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSMVIP00005008931 |
SH3_12 |
PF18129 |
7.1e-20 |
1 |
ENSMVIP00005008931 |
XRN_N |
PF03159 |
2.2e-94 |
2 |
ENSMVIP00005008931 |
XRN1_D1 |
PF18332 |
3.9e-32 |
3 |
ENSMVIP00005008873 |
SH3_12 |
PF18129 |
7.2e-20 |
1 |
ENSMVIP00005008873 |
XRN_N |
PF03159 |
6.9e-94 |
2 |
ENSMVIP00005008873 |
XRN1_D1 |
PF18332 |
4.6e-32 |
3 |
ENSMVIP00005008892 |
SH3_12 |
PF18129 |
7.2e-20 |
1 |
ENSMVIP00005008892 |
XRN_N |
PF03159 |
6.9e-94 |
2 |
ENSMVIP00005008892 |
XRN1_D1 |
PF18332 |
4.5e-32 |
3 |
ENSMVIP00005008945 |
XRN_N |
PF03159 |
2.9e-94 |
1 |
ENSMVIP00005008945 |
XRN1_D1 |
PF18332 |
1.7e-06 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSMVIT00005010128 |
5025 |
1674aa |
ENSMVIP00005008873 |
- |
ENSMVIT00005010148 |
5013 |
1670aa |
ENSMVIP00005008892 |
- |
ENSMVIT00005010195 |
4998 |
1665aa |
ENSMVIP00005008931 |
- |
ENSMVIT00005010215 |
2907 |
968aa |
ENSMVIP00005008945 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSMVIG00005005973 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSMVIG00005005973 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |