Description

Ensembl ID ENSMUSG00000071415 Gene ID 65019 Accession -
Symbol Rpl23 Alias 2810009A01Rik Full Name ribosomal protein L23
Status Confidence Length 4911 bases Strand Minus strand
Position 11 : 97668353 - 97673263 RNA binding domain Ribosomal_L14
Summary Predicted to enable several functions, including transcription coactivator binding activity; ubiquitin ligase inhibitor activity; and ubiquitin protein ligase binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in several processes, including cellular response to actinomycin D; negative regulation of nitrogen compound metabolic process; and protein stabilization. Predicted to act upstream of or within translation. Located in nucleolus. Is expressed in several structures, including central nervous system; retina; and uterus. Orthologous to human RPL23 (ribosomal protein L23). [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSMUSP00000099435 Ribosomal_L14 PF00238 1.1e-35 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Rpl23-201 ENSMUST00000103146 1059 140aa ENSMUSP00000099435
Rpl23-204 ENSMUST00000151118 728 No protein -
Rpl23-203 ENSMUST00000150955 480 No protein -
Rpl23-205 ENSMUST00000151965 658 No protein -
Rpl23-202 ENSMUST00000128801 334 60aa ENSMUSP00000117316

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMUSG00000071415

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMUSG00000071415

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000122involved_in negative regulation of transcription by RNA polymerase II1ISOMus_musculus(10090)Process
GO:0001223enables transcription coactivator binding1ISOMus_musculus(10090)Function
GO:0002181involved_in cytoplasmic translation1NASMus_musculus(10090)Process
GO:0003735enables structural constituent of ribosome3IBA,IDA,ISOMus_musculus(10090)Function
GO:0005515enables protein binding1IPIMus_musculus(10090)Function
GO:0005654located_in nucleoplasm1ISOMus_musculus(10090)Component
GO:0005730located_in nucleolus2IDA,ISOMus_musculus(10090)Component
GO:0005737located_in cytoplasm2ISO,NASMus_musculus(10090)Component
GO:0005829located_in cytosol1TASMus_musculus(10090)Component
GO:0005840located_in ribosome2ISO,NASMus_musculus(10090)Component
GO:0006412acts_upstream_of_or_within translation1ISOMus_musculus(10090)Process
GO:0008284involved_in positive regulation of cell population proliferation1ISOMus_musculus(10090)Process
GO:0010628involved_in positive regulation of gene expression1ISOMus_musculus(10090)Process
GO:0014069is_active_in postsynaptic density1ISOMus_musculus(10090)Component
GO:0022625part_of cytosolic large ribosomal subunit4IBA,IDA,IPI,ISOMus_musculus(10090)Component
GO:0022626located_in cytosolic ribosome1ISOMus_musculus(10090)Component
GO:0031625enables ubiquitin protein ligase binding1ISOMus_musculus(10090)Function
GO:0032986involved_in protein-DNA complex disassembly1ISOMus_musculus(10090)Process
GO:0032991part_of protein-containing complex1ISOMus_musculus(10090)Component
GO:0045202is_active_in synapse3EXP,IDA,NASMus_musculus(10090)Component
GO:0050821involved_in protein stabilization1ISOMus_musculus(10090)Process
GO:0070180enables large ribosomal subunit rRNA binding1IBAMus_musculus(10090)Function
GO:0070314acts_upstream_of_or_within G1 to G0 transition1ISOMus_musculus(10090)Process
GO:0072717involved_in cellular response to actinomycin D1ISOMus_musculus(10090)Process
GO:0098793is_active_in presynapse1NASMus_musculus(10090)Component
GO:0098794is_active_in postsynapse1NASMus_musculus(10090)Component
GO:0140236involved_in translation at presynapse1NASMus_musculus(10090)Process
GO:0140242involved_in translation at postsynapse1NASMus_musculus(10090)Process
GO:1901798involved_in positive regulation of signal transduction by p53 class mediator1ISOMus_musculus(10090)Process
GO:1903450acts_upstream_of_or_within regulation of G1 to G0 transition1ISOMus_musculus(10090)Process
GO:1904667involved_in negative regulation of ubiquitin protein ligase activity1ISOMus_musculus(10090)Process
GO:1990904part_of ribonucleoprotein complex1IEAMus_musculus(10090)Component
GO:1990948enables ubiquitin ligase inhibitor activity1ISOMus_musculus(10090)Function
GO:2000059involved_in negative regulation of ubiquitin-dependent protein catabolic process1ISOMus_musculus(10090)Process

Expression