RBP Type
N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq
Ensembl ID ENSMUSG00000071415 Gene ID
65019
Accession
-
Symbol
Rpl23
Alias
2810009A01Rik
Full Name
ribosomal protein L23
Status
Confidence
Length
4911 bases
Strand
Minus strand
Position
11 : 97668353 - 97673263
RNA binding domain
Ribosomal_L14
Summary
Predicted to enable several functions, including transcription coactivator binding activity; ubiquitin ligase inhibitor activity; and ubiquitin protein ligase binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in several processes, including cellular response to actinomycin D; negative regulation of nitrogen compound metabolic process; and protein stabilization. Predicted to act upstream of or within translation. Located in nucleolus. Is expressed in several structures, including central nervous system; retina; and uterus. Orthologous to human RPL23 (ribosomal protein L23). [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSMUSP00000099435
Ribosomal_L14
PF00238
1.1e-35
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
Rpl23-201
ENSMUST00000103146
1059
140aa
ENSMUSP00000099435
Rpl23-204
ENSMUST00000151118
728
No protein
-
Rpl23-203
ENSMUST00000150955
480
No protein
-
Rpl23-205
ENSMUST00000151965
658
No protein
-
Rpl23-202
ENSMUST00000128801
334
60aa
ENSMUSP00000117316
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSMUSG00000071415
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSMUSG00000071415
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000122 involved_in negative regulation of transcription by RNA polymerase II 1 ISO Mus_musculus(10090) Process GO:0001223 enables transcription coactivator binding 1 ISO Mus_musculus(10090) Function GO:0002181 involved_in cytoplasmic translation 1 NAS Mus_musculus(10090) Process GO:0003735 enables structural constituent of ribosome 3 IBA,IDA,ISO Mus_musculus(10090) Function GO:0005515 enables protein binding 1 IPI Mus_musculus(10090) Function GO:0005654 located_in nucleoplasm 1 ISO Mus_musculus(10090) Component GO:0005730 located_in nucleolus 2 IDA,ISO Mus_musculus(10090) Component GO:0005737 located_in cytoplasm 2 ISO,NAS Mus_musculus(10090) Component GO:0005829 located_in cytosol 1 TAS Mus_musculus(10090) Component GO:0005840 located_in ribosome 2 ISO,NAS Mus_musculus(10090) Component GO:0006412 acts_upstream_of_or_within translation 1 ISO Mus_musculus(10090) Process GO:0008284 involved_in positive regulation of cell population proliferation 1 ISO Mus_musculus(10090) Process GO:0010628 involved_in positive regulation of gene expression 1 ISO Mus_musculus(10090) Process GO:0014069 is_active_in postsynaptic density 1 ISO Mus_musculus(10090) Component GO:0022625 part_of cytosolic large ribosomal subunit 4 IBA,IDA,IPI,ISO Mus_musculus(10090) Component GO:0022626 located_in cytosolic ribosome 1 ISO Mus_musculus(10090) Component GO:0031625 enables ubiquitin protein ligase binding 1 ISO Mus_musculus(10090) Function GO:0032986 involved_in protein-DNA complex disassembly 1 ISO Mus_musculus(10090) Process GO:0032991 part_of protein-containing complex 1 ISO Mus_musculus(10090) Component GO:0045202 is_active_in synapse 3 EXP,IDA,NAS Mus_musculus(10090) Component GO:0050821 involved_in protein stabilization 1 ISO Mus_musculus(10090) Process GO:0070180 enables large ribosomal subunit rRNA binding 1 IBA Mus_musculus(10090) Function GO:0070314 acts_upstream_of_or_within G1 to G0 transition 1 ISO Mus_musculus(10090) Process GO:0072717 involved_in cellular response to actinomycin D 1 ISO Mus_musculus(10090) Process GO:0098793 is_active_in presynapse 1 NAS Mus_musculus(10090) Component GO:0098794 is_active_in postsynapse 1 NAS Mus_musculus(10090) Component GO:0140236 involved_in translation at presynapse 1 NAS Mus_musculus(10090) Process GO:0140242 involved_in translation at postsynapse 1 NAS Mus_musculus(10090) Process GO:1901798 involved_in positive regulation of signal transduction by p53 class mediator 1 ISO Mus_musculus(10090) Process GO:1903450 acts_upstream_of_or_within regulation of G1 to G0 transition 1 ISO Mus_musculus(10090) Process GO:1904667 involved_in negative regulation of ubiquitin protein ligase activity 1 ISO Mus_musculus(10090) Process GO:1990904 part_of ribonucleoprotein complex 1 IEA Mus_musculus(10090) Component GO:1990948 enables ubiquitin ligase inhibitor activity 1 ISO Mus_musculus(10090) Function GO:2000059 involved_in negative regulation of ubiquitin-dependent protein catabolic process 1 ISO Mus_musculus(10090) Process
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