RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Ensembl ID	ENSMUSG00000068882	Gene ID	20823	Accession	-
Symbol	Ssb	Alias	SS-B	Full Name	small RNA binding exonuclease protection factor La
Status	Confidence	Length	10285 bases	Strand	Plus strand
Position	2 : 69691906 - 69702190	RNA binding domain	RRM_3 , RRM_1 , La
Summary	Enables RNA binding activity. Predicted to be involved in several processes, including IRES-dependent viral translational initiation; RNA metabolic process; and protein localization to cytoplasmic stress granule. Located in nucleus. Is expressed in several structures, including central nervous system; early conceptus; gonad; sensory organ; and spleen. Orthologous to human SSB (small RNA binding exonuclease protection factor La). [provided by Alliance of Genome Resources, Apr 2022]

Protein	Domain	Pfam ID	E-value	Domain number
ENSMUSP00000088365	RRM_1	PF00076	3.8e-12	1
ENSMUSP00000088365	RRM_3	PF08777	9.3e-28	2
ENSMUSP00000088365	La	PF05383	1.4e-21	3
ENSMUSP00000130313	RRM_1	PF00076	3.8e-12	1
ENSMUSP00000130313	RRM_3	PF08777	9.3e-28	2
ENSMUSP00000130313	La	PF05383	1.4e-21	3
ENSMUSP00000107879	RRM_1	PF00076	8.8e-10	1
ENSMUSP00000107879	La	PF05383	5.5e-22	2
ENSMUSP00000119773	RRM_1	PF00076	0.00025	1
ENSMUSP00000119773	La	PF05383	4.6e-22	2
ENSMUSP00000115666	RRM_3	PF08777	3.6e-28	1

Pubmed ID	Full Name	Cell	Author	Time	Doi

Pubmed ID	Title	Author	Time	Journal

Name	Transcript ID	bp	Protein	Translation ID
Ssb-201	ENSMUST00000090852	2001	415aa	ENSMUSP00000088365
Ssb-203	ENSMUST00000132186	1563	159aa	ENSMUSP00000119773
Ssb-202	ENSMUST00000112260	634	184aa	ENSMUSP00000107879
Ssb-205	ENSMUST00000156057	666	No protein	-
Ssb-204	ENSMUST00000132603	991	230aa	ENSMUSP00000115666
Ssb-206	ENSMUST00000166411	2088	415aa	ENSMUSP00000130313

Pathway ID	Pathway Name	Source

ensgID	Trait	pValue	Pubmed ID

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Ensembl ID	Source				Target
	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMUSG00000068882	[{"sID": "ENSMUSG00000068882"	"sSP": "mus_musculus"	"sProtein": "ENSMUSP00000130313"	"sPercPos": 32.0482	"sPercID": 16.6265	"tID": "ENSMUSG00000037331"	"tSP": "mus_musculus"	"tGene": "Larp1"

Ensembl ID	Source				Target
	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMUSG00000068882

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0000049	enables tRNA binding	1	ISO	Mus_musculus(10090)	Function
GO:0001682	involved_in tRNA 5-leader removal	1	ISO	Mus_musculus(10090)	Process
GO:0003676	enables nucleic acid binding	1	IEA	Mus_musculus(10090)	Function
GO:0003677	enables DNA binding	1	ISO	Mus_musculus(10090)	Function
GO:0003723	enables RNA binding	2	IDA,ISO	Mus_musculus(10090)	Function
GO:0003729	enables mRNA binding	1	IBA	Mus_musculus(10090)	Function
GO:0005634	is_active_in nucleus	3	IBA,IDA,ISO	Mus_musculus(10090)	Component
GO:0005737	located_in cytoplasm	1	ISO	Mus_musculus(10090)	Component
GO:0005829	is_active_in cytosol	1	IBA	Mus_musculus(10090)	Component
GO:0006396	involved_in RNA processing	1	IEA	Mus_musculus(10090)	Process
GO:0006409	involved_in tRNA export from nucleus	1	ISO	Mus_musculus(10090)	Process
GO:0008033	involved_in tRNA processing	2	IBA,ISO	Mus_musculus(10090)	Process
GO:0008266	enables poly(U) RNA binding	1	ISO	Mus_musculus(10090)	Function
GO:0010494	is_active_in cytoplasmic stress granule	1	IBA	Mus_musculus(10090)	Component
GO:0042780	involved_in tRNA 3-end processing	1	ISO	Mus_musculus(10090)	Process
GO:0045727	involved_in positive regulation of translation	1	IBA	Mus_musculus(10090)	Process
GO:0071045	involved_in nuclear histone mRNA catabolic process	1	ISO	Mus_musculus(10090)	Process
GO:0075522	involved_in IRES-dependent viral translational initiation	1	ISO	Mus_musculus(10090)	Process
GO:1903608	involved_in protein localization to cytoplasmic stress granule	1	ISO	Mus_musculus(10090)	Process
GO:1990825	enables sequence-specific mRNA binding	1	ISO	Mus_musculus(10090)	Function
GO:1990904	part_of ribonucleoprotein complex	1	IEA	Mus_musculus(10090)	Component