Description

Ensembl ID ENSMUSG00000037331 Gene ID 73158 Accession -
Symbol Larp1 Alias Larp;mKIAA0731;1810024J12Rik;3110040D16Rik Full Name La ribonucleoprotein 1, translational regulator
Status Confidence Length 52971 bases Strand Plus strand
Position 11 : 57899890 - 57952860 RNA binding domain La
Summary Predicted to enable eukaryotic initiation factor 4E binding activity; nucleic acid binding activity; and ribosomal small subunit binding activity. Predicted to be involved in several processes, including TORC1 signaling; cellular response to rapamycin; and posttranscriptional regulation of gene expression. Predicted to act upstream of or within regulation of translation. Predicted to be located in cytoplasm. Predicted to be part of TORC1 complex and polysome. Predicted to be active in cytoplasmic stress granule and cytosol. Predicted to colocalize with polysomal ribosome. Is expressed in several structures, including branchial arch; cranial ganglion; epithelium; future spinal cord; and limb bud. Orthologous to human LARP1 (La ribonucleoprotein 1, translational regulator). [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSMUSP00000071421 La PF05383 4.3e-20 1
ENSMUSP00000136673 La PF05383 4.5e-20 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Larp1-201 ENSMUST00000071487 6614 1072aa ENSMUSP00000071421
Larp1-202 ENSMUST00000140500 747 No protein -
Larp1-203 ENSMUST00000178636 6617 1072aa ENSMUSP00000136673

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMUSG00000037331[{"sID": "ENSMUSG00000037331" "sSP": "mus_musculus" "sProtein": "ENSMUSP00000136673" "sPercPos": 12.4067 "sPercID": 6.43657 "tID": "ENSMUSG00000068882" "tSP": "mus_musculus" "tGene": "Ssb"

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMUSG00000037331

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000339enables RNA cap binding1ISOMus_musculus(10090)Function
GO:0000340enables RNA 7-methylguanosine cap binding1ISOMus_musculus(10090)Function
GO:0003723enables RNA binding1IBAMus_musculus(10090)Function
GO:0003730enables mRNA 3-UTR binding1ISOMus_musculus(10090)Function
GO:0005737located_in cytoplasm2ISA,ISOMus_musculus(10090)Component
GO:0005829is_active_in cytosol1IBAMus_musculus(10090)Component
GO:0005844part_of polysome1ISOMus_musculus(10090)Component
GO:0006413involved_in translational initiation1ISOMus_musculus(10090)Process
GO:0006417acts_upstream_of_or_within regulation of translation1IEAMus_musculus(10090)Process
GO:0008190enables eukaryotic initiation factor 4E binding1ISOMus_musculus(10090)Function
GO:0008283involved_in cell population proliferation1ISOMus_musculus(10090)Process
GO:0008494enables translation activator activity1ISOMus_musculus(10090)Function
GO:0010494is_active_in cytoplasmic stress granule2IBA,ISOMus_musculus(10090)Component
GO:0010608involved_in post-transcriptional regulation of gene expression1ISOMus_musculus(10090)Process
GO:0016239involved_in positive regulation of macroautophagy1ISOMus_musculus(10090)Process
GO:0017148involved_in negative regulation of translation1ISOMus_musculus(10090)Process
GO:0031369enables translation initiation factor binding1ISOMus_musculus(10090)Function
GO:0031929involved_in TOR signaling1ISOMus_musculus(10090)Process
GO:0031931part_of TORC1 complex1ISOMus_musculus(10090)Component
GO:0038202involved_in TORC1 signaling1ISOMus_musculus(10090)Process
GO:0042788colocalizes_with polysomal ribosome1ISOMus_musculus(10090)Component
GO:0043024enables ribosomal small subunit binding1ISOMus_musculus(10090)Function
GO:0045070involved_in positive regulation of viral genome replication1ISOMus_musculus(10090)Process
GO:0045727involved_in positive regulation of translation1IBAMus_musculus(10090)Process
GO:0045947involved_in negative regulation of translational initiation1ISOMus_musculus(10090)Process
GO:0045948involved_in positive regulation of translational initiation1ISOMus_musculus(10090)Process
GO:0048027enables mRNA 5-UTR binding1ISOMus_musculus(10090)Function
GO:0048255involved_in mRNA stabilization1ISOMus_musculus(10090)Process
GO:0072752involved_in cellular response to rapamycin1ISOMus_musculus(10090)Process
GO:1990928involved_in response to amino acid starvation1ISOMus_musculus(10090)Process

Expression