RBP Type
N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq
Ensembl ID ENSMUSG00000031134 Gene ID
19655
Accession
-
Symbol
Rbmx
Alias
hnRNPG
Full Name
RNA binding motif protein, X chromosome
Status
Confidence
Length
9507 bases
Strand
Minus strand
Position
X : 56428890 - 56438396
RNA binding domain
RBM1CTR , RRM_1
Summary
Predicted to enable several functions, including chromatin binding activity; identical protein binding activity; and nucleic acid binding activity. Predicted to be involved in several processes, including RNA metabolic process; cellular response to interleukin-1; and regulation of RNA metabolic process. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in euchromatin; extracellular exosome; and nucleus. Predicted to be part of catalytic step 2 spliceosome and supraspliceosomal complex. Is expressed in several structures, including central nervous system; female reproductive system; gut; sensory organ; and thymus. Human ortholog(s) of this gene implicated in syndromic X-linked intellectual disability Shashi type. Orthologous to human RBMX (RNA binding motif protein X-linked). [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSMUSP00000118121
RRM_1
PF00076
8.1e-24
1
ENSMUSP00000125720
RRM_1
PF00076
7.7e-23
1
ENSMUSP00000125720
RBM1CTR
PF08081
1.6e-22
2
ENSMUSP00000096070
RRM_1
PF00076
7.8e-23
1
ENSMUSP00000096070
RBM1CTR
PF08081
1.8e-22
2
ENSMUSP00000110374
RRM_1
PF00076
1.2e-22
1
ENSMUSP00000110374
RBM1CTR
PF08081
2.6e-22
2
ENSMUSP00000110378
RRM_1
PF00076
1.2e-22
1
ENSMUSP00000110378
RBM1CTR
PF08081
2.6e-22
2
ENSMUSP00000138198
RBM1CTR
PF08081
1.4e-22
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
Rbmx-205
ENSMUST00000140384
2139
289aa
ENSMUSP00000125720
Rbmx-201
ENSMUST00000098470
3107
301aa
ENSMUSP00000096070
Rbmx-203
ENSMUST00000114730
2019
391aa
ENSMUSP00000110378
Rbmx-202
ENSMUST00000114726
2108
391aa
ENSMUSP00000110374
Rbmx-206
ENSMUST00000143310
1296
263aa
ENSMUSP00000138198
Rbmx-204
ENSMUST00000133346
434
103aa
ENSMUSP00000118121
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSMUSG00000031134 [{"sID": "ENSMUSG00000031134" "sSP": "mus_musculus" "sProtein": "ENSMUSP00000110374" "sPercPos": 97.4425 "sPercID": 96.4194 "tID": "ENSMUSG00000037070" "tSP": "mus_musculus" "tGene": "Rbmxl1"
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSMUSG00000031134
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000381 involved_in regulation of alternative mRNA splicing, via spliceosome 1 ISO Mus_musculus(10090) Process GO:0000791 part_of euchromatin 1 ISO Mus_musculus(10090) Component GO:0000978 enables RNA polymerase II cis-regulatory region sequence-specific DNA binding 1 ISO Mus_musculus(10090) Function GO:0003676 enables nucleic acid binding 1 IEA Mus_musculus(10090) Function GO:0003682 enables chromatin binding 1 ISO Mus_musculus(10090) Function GO:0003723 enables RNA binding 2 IBA,ISO Mus_musculus(10090) Function GO:0003727 enables single-stranded RNA binding 1 ISO Mus_musculus(10090) Function GO:0003729 enables mRNA binding 1 ISO Mus_musculus(10090) Function GO:0005634 located_in nucleus 1 ISO Mus_musculus(10090) Component GO:0005681 part_of spliceosomal complex 1 IBA Mus_musculus(10090) Component GO:0006366 involved_in transcription by RNA polymerase II 1 ISO Mus_musculus(10090) Process GO:0006376 involved_in mRNA splice site recognition 1 ISO Mus_musculus(10090) Process GO:0006397 acts_upstream_of_or_within mRNA processing 1 IEA Mus_musculus(10090) Process GO:0006509 involved_in membrane protein ectodomain proteolysis 1 ISO Mus_musculus(10090) Process GO:0008380 acts_upstream_of_or_within RNA splicing 1 IEA Mus_musculus(10090) Process GO:0014069 is_active_in postsynaptic density 1 ISO Mus_musculus(10090) Component GO:0019904 enables protein domain specific binding 1 ISO Mus_musculus(10090) Function GO:0032991 part_of protein-containing complex 1 ISO Mus_musculus(10090) Component GO:0042802 enables identical protein binding 1 ISO Mus_musculus(10090) Function GO:0044530 part_of supraspliceosomal complex 1 ISO Mus_musculus(10090) Component GO:0045893 involved_in positive regulation of DNA-templated transcription 1 ISO Mus_musculus(10090) Process GO:0045944 involved_in positive regulation of transcription by RNA polymerase II 1 ISO Mus_musculus(10090) Process GO:0048026 involved_in positive regulation of mRNA splicing, via spliceosome 1 IBA Mus_musculus(10090) Process GO:0070062 located_in extracellular exosome 1 ISO Mus_musculus(10090) Component GO:0071013 part_of catalytic step 2 spliceosome 1 ISO Mus_musculus(10090) Component GO:0071347 involved_in cellular response to interleukin-1 1 ISO Mus_musculus(10090) Process GO:0098978 is_active_in glutamatergic synapse 1 ISO Mus_musculus(10090) Component GO:0099175 involved_in regulation of postsynapse organization 1 ISO Mus_musculus(10090) Process GO:1990904 part_of ribonucleoprotein complex 1 IEA Mus_musculus(10090) Component
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