Description

Ensembl ID ENSMUSG00000025762 Gene ID 214048 Accession -
Symbol Larp1b Alias Larp2;1700108L22Rik;4933421B21Rik Full Name La ribonucleoprotein 1B
Status Confidence Length 90369 bases Strand Plus strand
Position 3 : 40904263 - 40994631 RNA binding domain La
Summary Predicted to enable RNA binding activity. Predicted to be involved in positive regulation of translation. Predicted to be active in cytoplasmic stress granule and cytosol. Orthologous to human LARP1B (La ribonucleoprotein 1B). [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSMUSP00000141487 La PF05383 4.6e-22 1
ENSMUSP00000142106 La PF05383 1.1e-21 1
ENSMUSP00000037127 La PF05383 1.3e-21 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
Larp1b-202 ENSMUST00000048490 2497 541aa ENSMUSP00000037127
Larp1b-206 ENSMUST00000191872 1505 288aa ENSMUSP00000142106
Larp1b-214 ENSMUST00000200432 374 14aa ENSMUSP00000143244
Larp1b-211 ENSMUST00000197092 103 No protein -
Larp1b-208 ENSMUST00000191998 619 No protein -
Larp1b-207 ENSMUST00000191882 1994 No protein -
Larp1b-203 ENSMUST00000065411 4156 No protein -
Larp1b-209 ENSMUST00000192456 1565 No protein -
Larp1b-212 ENSMUST00000197214 328 No protein -
Larp1b-210 ENSMUST00000194006 1555 No protein -
Larp1b-213 ENSMUST00000199797 159 No protein -
Larp1b-205 ENSMUST00000191805 1705 335aa ENSMUSP00000141487
Larp1b-201 ENSMUST00000026862 1541 102aa ENSMUSP00000026862
Larp1b-204 ENSMUST00000099121 1030 248aa ENSMUSP00000096721

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMUSG00000025762[{"sID": "ENSMUSG00000025762" "sSP": "mus_musculus" "sProtein": "ENSMUSP00000037127" "sPercPos": 51.5712 "sPercID": 36.9686 "tID": "ENSMUSG00000037331" "tSP": "mus_musculus" "tGene": "Larp1"

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMUSG00000025762

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression