RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSMUGG00000018425	Gene ID	110547069	Accession	-
Symbol		Alias	-	Full Name	tetratricopeptide repeat protein 39B-like
Status	Confidence	Length	1815 bases	Strand	Plus strand
Position	NHTI01000127.1 : 1152465 - 1154279	RNA binding domain	Iml2-TPR_39
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMUGP00000021923	Iml2-TPR_39	PF10300	1.7e-148	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMUGT00000025167	1815	604aa	ENSMUGP00000021923

Gene Model

Click here to download ENSMUGG00000018425's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMUGG00000018425's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMUGG00000018425

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMUGG00000018425

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression