RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMODG00000048171	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1771 bases	Strand	Minus strand
Position	2 : 34066441 - 34068211	RNA binding domain	Ribosomal_L37ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMODP00000042208	Ribosomal_L37ae	PF01780	1.2e-23	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMODT00000061239	204	67aa	ENSMODP00000042208

Gene Model

Click here to download ENSMODG00000048171's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMODG00000048171's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000059229	29.1667	22.9167	monodelphis_domestica	ENSMODP00000042208	41.791	32.8358
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000058728	69.1176	63.2353	monodelphis_domestica	ENSMODP00000042208	70.1493	64.1791
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000037042	42.6471	33.8235	monodelphis_domestica	ENSMODP00000042208	43.2836	34.3284
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000056480	51.4851	45.5446	monodelphis_domestica	ENSMODP00000042208	77.6119	68.6567
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000049610	59.7826	53.2609	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	sarcophilus_harrisii	ENSSHAP00000041769	47.7876	42.4779
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	47.7612	38.806	cercocebus_atys	ENSCATP00000038184	49.2308	40
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	47.7612	38.806	macaca_fascicularis	ENSMFAP00000012481	49.2308	40
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	47.7612	38.806	papio_anubis	ENSPANP00000040989	49.2308	40
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	46.2687	37.3134	mandrillus_leucophaeus	ENSMLEP00000016290	50	40.3226
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	70.1493	64.1791	canis_lupus_familiaris	ENSCAFP00845025779	79.661	72.8814
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	67.1642	64.1791	vulpes_vulpes	ENSVVUP00000015819	77.5862	74.1379
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	68.6567	56.7164	ursus_americanus	ENSUAMP00000009577	53.4884	44.186
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	43.2836	35.8209	delphinapterus_leucas	ENSDLEP00000014993	31.8681	26.3736
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	71.6418	67.1642	camelus_dromedarius	ENSCDRP00005012900	64.8649	60.8108
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	73.1343	71.6418	camelus_dromedarius	ENSCDRP00005013843	62.8205	61.5385
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	68.6567	52.2388	bos_taurus	ENSBTAP00000070827	52.2727	39.7727
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	65.6716	59.7015	marmota_marmota_marmota	ENSMMMP00000027505	64.7059	58.8235
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	68.6567	59.7015	urocitellus_parryii	ENSUPAP00010008954	54.1176	47.0588
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	71.6418	65.6716	rattus_norvegicus	ENSRNOP00000094331	73.8462	67.6923
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	68.6567	65.6716	mus_spicilegus	ENSMSIP00000030271	64.7887	61.9718
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	microcebus_murinus	ENSMICP00000038552	56.25	50
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	70.1493	64.1791	saimiri_boliviensis_boliviensis	ENSSBOP00000007541	62.6667	57.3333
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	61.194	56.7164	bison_bison_bison	ENSBBBP00000000291	42.268	39.1753
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	68.6567	52.2388	bos_indicus_hybrid	ENSBIXP00005007715	52.2727	39.7727
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	44.7761	41.791	vombatus_ursinus	ENSVURP00010007492	47.619	44.4444
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	prolemur_simus	ENSPSMP00000035209	56.25	50
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	65.6716	61.194	cebus_imitator	ENSCCAP00000028291	74.5763	69.4915
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	46.2687	40.2985	phocoena_sinus	ENSPSNP00000000190	36.4706	31.7647
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	67.1642	55.2239	carlito_syrichta	ENSTSYP00000025938	57.6923	47.4359
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	50.7463	41.791	sciurus_vulgaris	ENSSVLP00005023145	48.5714	40
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	68.6567	64.1791	bos_mutus	ENSBMUP00000033969	52.2727	48.8636
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	73.1343	70.1493	cervus_hanglu_yarkandensis	ENSCHYP00000037656	68.0556	65.2778
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	pteropus_vampyrus	ENSPVAP00000005767	59.3407	52.7473
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	76.1194	65.6716	jaculus_jaculus	ENSJJAP00000017735	50.495	43.5644
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	46.2687	37.3134	propithecus_coquereli	ENSPCOP00000013207	40.7895	32.8947
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	70.1493	64.1791	canis_lupus_dingo	ENSCAFP00020013361	79.661	72.8814
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	71.6418	68.6567	canis_lupus_dingo	ENSCAFP00020018196	70.5882	67.6471
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	67.1642	64.1791	moschus_moschiferus	ENSMMSP00000009403	67.1642	64.1791
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	49.2537	40.2985	moschus_moschiferus	ENSMMSP00000000491	49.2537	40.2985
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	71.6418	62.6866	peromyscus_maniculatus_bairdii	ENSPEMP00000033474	59.2593	51.8519
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	74.6269	petromyzon_marinus	ENSPMAP00000000001	59.7826	54.3478
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	65.6716	eptatretus_burgeri	ENSEBUP00000008712	45.082	36.0656
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	callorhinchus_milii	ENSCMIP00000038383	26.4706	23.5294
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	74.6269	latimeria_chalumnae	ENSLACP00000013146	59.7826	54.3478
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	esox_lucius	ENSELUP00000034166	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	salmo_salar	ENSSSAP00000168002	12.4434	11.086
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	gadus_morhua	ENSGMOP00000047570	58.6957	52.1739
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	fundulus_heteroclitus	ENSFHEP00000016949	58.6957	52.1739
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	poecilia_reticulata	ENSPREP00000031565	57.4468	51.0638
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	xiphophorus_maculatus	ENSXMAP00000022527	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	oryzias_latipes	ENSORLP00000014370	60	53.3333
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	cyclopterus_lumpus	ENSCLMP00005030659	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	50.7463	41.791	oreochromis_niloticus	ENSONIP00000032425	50	41.1765
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	haplochromis_burtoni	ENSHBUP00000034754	60	53.3333
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	astatotilapia_calliptera	ENSACLP00000026553	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	79.1045	68.6567	sparus_aurata	ENSSAUP00010064465	57.6087	50
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	73.1343	70.1493	lates_calcarifer	ENSLCAP00010008751	47.1154	45.1923
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	xenopus_tropicalis	ENSXETP00000067902	67.5	60
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	44.7761	38.806	chrysemys_picta_bellii	ENSCPBP00000037712	46.875	40.625
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	77.6119	68.6567	dicentrarchus_labrax	ENSDLAP00005057152	61.1765	54.1176
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	cyprinodon_variegatus	ENSCVAP00000013185	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	71.6418	tetraodon_nigroviridis	ENSTNIP00000010730	59.7826	52.1739
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	poecilia_formosa	ENSPFOP00000014682	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	50.7463	41.791	nothobranchius_furzeri	ENSNFUP00015025358	50	41.1765
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	49.2537	40.2985	podarcis_muralis	ENSPMRP00000016028	46.4789	38.0282
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	43.2836	37.3134	podarcis_muralis	ENSPMRP00000006008	47.541	40.9836
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	oryzias_sinensis	ENSOSIP00000014190	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	70.1493	betta_splendens	ENSBSLP00000050988	58.6957	51.087
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	acanthochromis_polyacanthus	ENSAPOP00000026370	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	neolamprologus_brichardi	ENSNBRP00000020778	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	seriola_dumerili	ENSSDUP00000002450	60.4396	53.8462
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	maylandia_zebra	ENSMZEP00005014902	60	53.3333
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	poecilia_latipinna	ENSPLAP00000016918	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	50.7463	41.791	anabas_testudineus	ENSATEP00000054710	50	41.1765
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	73.1343	labrus_bergylta	ENSLBEP00000005568	43.9024	39.8374
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	mastacembelus_armatus	ENSMAMP00000047072	33.75	30
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	amphiprion_percula	ENSAPEP00000030792	36.2416	32.2148
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	71.6418	68.6567	hucho_hucho	ENSHHUP00000068733	66.6667	63.8889
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	oryzias_javanicus	ENSOJAP00000027733	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	larimichthys_crocea	ENSLCRP00005034140	58.6957	52.1739
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	myripristis_murdjan	ENSMMDP00005031860	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	amphiprion_ocellaris	ENSAOCP00000023850	36.7347	32.6531
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	pundamilia_nyererei	ENSPNYP00000022426	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	stegastes_partitus	ENSSPAP00000004318	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	gasterosteus_aculeatus	ENSGACP00000016501	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	seriola_lalandi_dorsalis	ENSSLDP00000005195	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	oryzias_melastigma	ENSOMEP00000028375	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	71.6418	scophthalmus_maximus	ENSSMAP00000021009	56.8421	50.5263
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	80.597	70.1493	cynoglossus_semilaevis	ENSCSEP00000013732	58.6957	51.087
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	sander_lucioperca	ENSSLUP00000008945	59.7826	53.2609
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	71.6418	68.6567	oncorhynchus_tshawytscha	ENSOTSP00005079885	62.3377	59.7403
ENSMODG00000048171	monodelphis_domestica	ENSMODP00000042208	82.0896	73.1343	cottoperca_gobio	ENSCGOP00000025482	59.7826	53.2609

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression