RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMODG00000043549	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1292 bases	Strand	Plus strand
Position	3 : 26432000 - 26433291	RNA binding domain	Ribosomal_L37ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMODP00000059229	Ribosomal_L37ae	PF01780	2.2e-20	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMODT00000071975	291	96aa	ENSMODP00000059229

Gene Model

Click here to download ENSMODG00000043549's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMODG00000043549's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000058728	48.5294	47.0588	monodelphis_domestica	ENSMODP00000059229	34.375	33.3333
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000042208	41.791	32.8358	monodelphis_domestica	ENSMODP00000059229	29.1667	22.9167
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000037042	73.5294	70.5882	monodelphis_domestica	ENSMODP00000059229	52.0833	50
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000056480	52.4752	49.505	monodelphis_domestica	ENSMODP00000059229	55.2083	52.0833
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000049610	56.5217	54.3478	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	sarcophilus_harrisii	ENSSHAP00000041769	46.0177	44.2478
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	41.6667	41.6667	dasypus_novemcinctus	ENSDNOP00000031406	37.3832	37.3832
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	51.0417	50	macaca_fascicularis	ENSMFAP00000014820	57.6471	56.4706
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	44.7917	38.5417	pan_paniscus	ENSPPAP00000008994	51.1905	44.0476
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	40.625	36.4583	pan_troglodytes	ENSPTRP00000093619	50.6493	45.4545
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	ailuropoda_melanoleuca	ENSAMEP00000024358	56.5217	54.3478
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	46.875	44.7917	balaenoptera_musculus	ENSBMSP00010030043	42.0561	40.1869
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	loxodonta_africana	ENSLAFP00000024159	57.1429	53.8462
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	48.9583	46.875	ovis_aries_rambouillet	ENSOARP00020009900	54.023	51.7241
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	55.2083	52.0833	cavia_porcellus	ENSCPOP00000027907	48.6239	45.8716
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	52.0833	48.9583	rattus_norvegicus	ENSRNOP00000047513	54.3478	51.087
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	microcebus_murinus	ENSMICP00000038552	54.1667	52.0833
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	50	48.9583	rhinopithecus_roxellana	ENSRROP00000044423	58.5366	57.3171
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	vombatus_ursinus	ENSVURP00010015035	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	50	50	catagonus_wagneri	ENSCWAP00000016301	57.8313	57.8313
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	prolemur_simus	ENSPSMP00000035209	54.1667	52.0833
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	carlito_syrichta	ENSTSYP00000026500	56.5217	54.3478
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	51.0417	47.9167	microtus_ochrogaster	ENSMOCP00000002350	51.0417	47.9167
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	pteropus_vampyrus	ENSPVAP00000005767	57.1429	54.9451
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	42.7083	39.5833	phascolarctos_cinereus	ENSPCIP00000014187	51.8987	48.1013
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	46.875	43.75	peromyscus_maniculatus_bairdii	ENSPEMP00000033233	54.2169	50.6024
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	petromyzon_marinus	ENSPMAP00000000001	56.5217	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	48.9583	eptatretus_burgeri	ENSEBUP00000008712	42.623	38.5246
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	47.9167	callorhinchus_milii	ENSCMIP00000038383	25.4902	22.549
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	50	latimeria_chalumnae	ENSLACP00000013146	55.4348	52.1739
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	clupea_harengus	ENSCHAP00000043701	48.1481	45.3704
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	50	danio_rerio	ENSDARP00000149337	56.5217	52.1739
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	carassius_auratus	ENSCARP00000007525	56.5217	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	carassius_auratus	ENSCARP00000020048	53.0612	50
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	carassius_auratus	ENSCARP00000127999	53.0612	50
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	52.0833	47.9167	astyanax_mexicanus	ENSAMXP00000044376	54.3478	50
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	ictalurus_punctatus	ENSIPUP00000032395	56.5217	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	50	electrophorus_electricus	ENSEEEP00000002593	54.7368	50.5263
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	esox_lucius	ENSELUP00000034166	56.5217	54.3478
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	salmo_salar	ENSSSAP00000168002	11.7647	11.3122
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	gadus_morhua	ENSGMOP00000047570	56.5217	54.3478
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	fundulus_heteroclitus	ENSFHEP00000016949	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	poecilia_reticulata	ENSPREP00000031565	54.2553	52.1277
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	xiphophorus_maculatus	ENSXMAP00000022527	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	52.0833	50	oryzias_latipes	ENSORLP00000014370	55.5556	53.3333
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	cyclopterus_lumpus	ENSCLMP00005030659	56.5217	54.3478
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	oreochromis_niloticus	ENSONIP00000032425	75	72.0588
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	52.0833	50	haplochromis_burtoni	ENSHBUP00000034754	55.5556	53.3333
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	astatotilapia_calliptera	ENSACLP00000026553	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	sparus_aurata	ENSSAUP00010064465	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	cyprinodon_variegatus	ENSCVAP00000013185	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	tetraodon_nigroviridis	ENSTNIP00000010730	56.5217	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	poecilia_formosa	ENSPFOP00000014682	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	nothobranchius_furzeri	ENSNFUP00015025358	75	72.0588
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	denticeps_clupeoides	ENSDCDP00000000987	54.1667	51.0417
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	oryzias_sinensis	ENSOSIP00000014190	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	50	betta_splendens	ENSBSLP00000050988	56.5217	52.1739
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	acanthochromis_polyacanthus	ENSAPOP00000026370	56.5217	54.3478
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	neolamprologus_brichardi	ENSNBRP00000020778	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	52.0833	50	seriola_dumerili	ENSSDUP00000002450	54.9451	52.7473
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	hippocampus_comes	ENSHCOP00000011939	56.5217	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	52.0833	50	maylandia_zebra	ENSMZEP00005014902	55.5556	53.3333
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	poecilia_latipinna	ENSPLAP00000016918	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	sinocyclocheilus_grahami	ENSSGRP00000067018	56.5217	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	42.7083	40.625	naja_naja	ENSNNAP00000006425	51.25	48.75
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	anabas_testudineus	ENSATEP00000054710	75	72.0588
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	43.75	39.5833	anolis_carolinensis	ENSACAP00000005447	46.1538	41.7582
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	mastacembelus_armatus	ENSMAMP00000047072	31.875	30.625
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	amphiprion_percula	ENSAPEP00000030792	34.2282	32.8859
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	55.2083	51.0417	pygocentrus_nattereri	ENSPNAP00000001238	33.5443	31.0127
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	oryzias_javanicus	ENSOJAP00000027733	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	larimichthys_crocea	ENSLCRP00005034140	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	52.0833	myripristis_murdjan	ENSMMDP00005031860	56.5217	54.3478
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	amphiprion_ocellaris	ENSAOCP00000023850	34.6939	33.3333
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	pundamilia_nyererei	ENSPNYP00000022426	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	stegastes_partitus	ENSSPAP00000004318	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	gasterosteus_aculeatus	ENSGACP00000016501	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	seriola_lalandi_dorsalis	ENSSLDP00000005195	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	oryzias_melastigma	ENSOMEP00000028375	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	scophthalmus_maximus	ENSSMAP00000021009	53.6842	51.5789
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	54.1667	51.0417	cynoglossus_semilaevis	ENSCSEP00000013732	56.5217	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	sander_lucioperca	ENSSLUP00000008945	55.4348	53.2609
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	50	cyprinus_carpio_carpio	ENSCCRP00000019416	51	48
ENSMODG00000043549	monodelphis_domestica	ENSMODP00000059229	53.125	51.0417	cottoperca_gobio	ENSCGOP00000025482	55.4348	53.2609

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression