RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMODG00000040907	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1414 bases	Strand	Minus strand
Position	8 : 187550877 - 187552290	RNA binding domain	Ribosomal_L37ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMODP00000058728	Ribosomal_L37ae	PF01780	2.1e-28	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMODT00000052640	207	68aa	ENSMODP00000058728

Gene Model

Click here to download ENSMODG00000040907's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMODG00000040907's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000059229	34.375	33.3333	monodelphis_domestica	ENSMODP00000058728	48.5294	47.0588
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000042208	70.1493	64.1791	monodelphis_domestica	ENSMODP00000058728	69.1176	63.2353
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000037042	48.5294	47.0588	monodelphis_domestica	ENSMODP00000058728	48.5294	47.0588
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000056480	57.4257	53.4653	monodelphis_domestica	ENSMODP00000058728	85.2941	79.4118
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000049610	65.2174	63.0435	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	sarcophilus_harrisii	ENSSHAP00000041769	52.2124	50.4425
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	dasypus_novemcinctus	ENSDNOP00000031406	56.0748	54.2056
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	ailuropoda_melanoleuca	ENSAMEP00000024358	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	83.8235	82.3529	loxodonta_africana	ENSLAFP00000024159	62.6374	61.5385
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	ovis_aries_rambouillet	ENSOARP00020023040	71.9512	69.5122
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	83.8235	rattus_norvegicus	ENSRNOP00000047513	65.2174	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	83.8235	octodon_degus	ENSODEP00000025970	65.2174	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	microcebus_murinus	ENSMICP00000038552	61.4583	59.375
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	83.8235	vombatus_ursinus	ENSVURP00010015035	65.2174	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	prolemur_simus	ENSPSMP00000035209	61.4583	59.375
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	carlito_syrichta	ENSTSYP00000026500	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	pteropus_vampyrus	ENSPVAP00000005767	64.8352	62.6374
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	canis_lupus_dingo	ENSCAFP00020030041	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	petromyzon_marinus	ENSPMAP00000000001	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	77.9412	eptatretus_burgeri	ENSEBUP00000008712	47.541	43.4426
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	82.3529	callorhinchus_milii	ENSCMIP00000038383	28.9216	27.451
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	latimeria_chalumnae	ENSLACP00000013146	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	clupea_harengus	ENSCHAP00000043701	55.5556	53.7037
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	danio_rerio	ENSDARP00000149337	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	carassius_auratus	ENSCARP00000007525	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	carassius_auratus	ENSCARP00000020048	60.2041	58.1633
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	carassius_auratus	ENSCARP00000127999	60.2041	58.1633
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	astyanax_mexicanus	ENSAMXP00000044376	63.0435	60.8696
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	ictalurus_punctatus	ENSIPUP00000032395	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	82.3529	electrophorus_electricus	ENSEEEP00000002593	62.1053	58.9474
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	esox_lucius	ENSELUP00000034166	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	salmo_salar	ENSSSAP00000168002	13.5747	13.1222
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	gadus_morhua	ENSGMOP00000047570	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	fundulus_heteroclitus	ENSFHEP00000016949	63.0435	60.8696
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	poecilia_reticulata	ENSPREP00000031565	61.7021	59.5745
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	xiphophorus_maculatus	ENSXMAP00000022527	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	oryzias_latipes	ENSORLP00000014370	64.4444	62.2222
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	cyclopterus_lumpus	ENSCLMP00005030659	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	54.4118	52.9412	oreochromis_niloticus	ENSONIP00000032425	54.4118	52.9412
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	haplochromis_burtoni	ENSHBUP00000034754	64.4444	62.2222
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	astatotilapia_calliptera	ENSACLP00000026553	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	79.4118	77.9412	sparus_aurata	ENSSAUP00010064465	58.6957	57.6087
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	cyprinodon_variegatus	ENSCVAP00000013185	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	82.3529	tetraodon_nigroviridis	ENSTNIP00000010730	64.1304	60.8696
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	poecilia_formosa	ENSPFOP00000014682	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	54.4118	52.9412	nothobranchius_furzeri	ENSNFUP00015025358	54.4118	52.9412
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	denticeps_clupeoides	ENSDCDP00000000987	61.4583	59.375
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	oryzias_sinensis	ENSOSIP00000014190	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	80.8824	betta_splendens	ENSBSLP00000050988	63.0435	59.7826
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	acanthochromis_polyacanthus	ENSAPOP00000026370	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	neolamprologus_brichardi	ENSNBRP00000020778	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	seriola_dumerili	ENSSDUP00000002450	64.8352	62.6374
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	hippocampus_comes	ENSHCOP00000011939	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	maylandia_zebra	ENSMZEP00005014902	64.4444	62.2222
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	poecilia_latipinna	ENSPLAP00000016918	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	sinocyclocheilus_grahami	ENSSGRP00000067018	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	naja_naja	ENSNNAP00000006425	72.5	70
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	54.4118	52.9412	anabas_testudineus	ENSATEP00000054710	54.4118	52.9412
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	83.8235	77.9412	anolis_carolinensis	ENSACAP00000005447	62.6374	58.2418
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	mastacembelus_armatus	ENSMAMP00000047072	36.25	35
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	amphiprion_percula	ENSAPEP00000030792	38.9262	37.5839
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	83.8235	pygocentrus_nattereri	ENSPNAP00000001238	37.9747	36.076
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	oryzias_javanicus	ENSOJAP00000027733	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	larimichthys_crocea	ENSLCRP00005034140	63.0435	60.8696
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	myripristis_murdjan	ENSMMDP00005031860	65.2174	63.0435
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	amphiprion_ocellaris	ENSAOCP00000023850	39.4558	38.0952
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	pundamilia_nyererei	ENSPNYP00000022426	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	stegastes_partitus	ENSSPAP00000004318	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	gasterosteus_aculeatus	ENSGACP00000016501	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	seriola_lalandi_dorsalis	ENSSLDP00000005195	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	oryzias_melastigma	ENSOMEP00000028375	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	82.3529	scophthalmus_maximus	ENSSMAP00000021009	61.0526	58.9474
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	85.2941	80.8824	cynoglossus_semilaevis	ENSCSEP00000013732	63.0435	59.7826
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	sander_lucioperca	ENSSLUP00000008945	64.1304	61.9565
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	88.2353	85.2941	cyprinus_carpio_carpio	ENSCCRP00000019416	60	58
ENSMODG00000040907	monodelphis_domestica	ENSMODP00000058728	86.7647	83.8235	cottoperca_gobio	ENSCGOP00000025482	64.1304	61.9565

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression