Description

Ensembl ID ENSMNEG00000016707 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 4024 bases Strand Minus strand
Position KQ004874.1 : 3616560 - 3620583 RNA binding domain zf-RNPHF , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSMNEP00000003670 zf-RNPHF PF08080 2.4e-11 1
ENSMNEP00000003670 RRM_1 PF00076 2e-07 2
ENSMNEP00000003676 zf-RNPHF PF08080 1.4e-10 1
ENSMNEP00000003676 RRM_1 PF00076 1.5e-23 2
ENSMNEP00000003676 RRM_1 PF00076 1.5e-23 3
ENSMNEP00000003676 RRM_1 PF00076 1.5e-23 4
ENSMNEP00000003662 zf-RNPHF PF08080 1.6e-10 1
ENSMNEP00000003662 RRM_1 PF00076 3.7e-29 2
ENSMNEP00000003662 RRM_1 PF00076 3.7e-29 3
ENSMNEP00000003662 RRM_1 PF00076 3.7e-29 4
ENSMNEP00000003652 zf-RNPHF PF08080 1.7e-10 1
ENSMNEP00000003652 RRM_1 PF00076 4.2e-29 2
ENSMNEP00000003652 RRM_1 PF00076 4.2e-29 3
ENSMNEP00000003659 zf-RNPHF PF08080 1.7e-10 1
ENSMNEP00000003659 RRM_1 PF00076 4.1e-29 2
ENSMNEP00000003659 RRM_1 PF00076 4.1e-29 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSMNET00000018543 1323 440aa ENSMNEP00000003652
- ENSMNET00000018584 1320 439aa ENSMNEP00000003659
- ENSMNET00000018593 1290 429aa ENSMNEP00000003662
- ENSMNET00000018647 798 265aa ENSMNEP00000003670
- ENSMNET00000018683 1227 408aa ENSMNEP00000003676

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000002200527.019118.5022macaca_nemestrinaENSMNEP0000000365241.818228.6364
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000001322524.755216.3636macaca_nemestrinaENSMNEP0000000365240.227326.5909
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000003087363.294855.4913macaca_nemestrinaENSMNEP0000000365249.772743.6364
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000003633018.699210.1045macaca_nemestrinaENSMNEP0000000365236.590919.7727
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000001250069.487263.8462macaca_nemestrinaENSMNEP0000000365261.590956.5909
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000508538.41226.1803macaca_nemestrinaENSMNEP0000000365240.681827.7273
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000004576016.98118.59539macaca_nemestrinaENSMNEP0000000365236.818218.6364
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000001677482.83979.8729macaca_nemestrinaENSMNEP0000000365288.863685.6818

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318285.2273ornithorhynchus_anatinusENSOANP0000003407983.262779.4492
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365271.363660.2273sarcophilus_harrisiiENSSHAP0000001500468.55957.8603
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.090985.6818sarcophilus_harrisiiENSSHAP0000004389583.050879.8729
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365272.045561.8182sarcophilus_harrisiiENSSHAP0000002760068.17258.4946
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365249.545547.7273notamacropus_eugeniiENSMEUP0000001331249.771747.9452
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818dasypus_novemcinctusENSDNOP0000002231287.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365248.636445.9091erinaceus_europaeusENSEEUP0000001433047.767945.0893
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.9545echinops_telfairiENSETEP0000000684087.527886.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.4091callithrix_jacchusENSCJAP0000000895987.750686.637
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365273.409172.5cercocebus_atysENSCATP0000001048890.985989.8592
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.4091macaca_fascicularisENSMFAP0000006373287.750686.637
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.4091macaca_mulattaENSMMUP0000002572087.750686.637
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818ursus_americanusENSUAMP0000002752687.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818equus_asinusENSEASP0000506163787.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365280.681879.7727pan_paniscusENSPPAP0000001046886.585485.6098
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365286.818285.6818pan_paniscusENSPPAP0000003662987.214686.0731
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.9545felis_catusENSFCAP0000001427987.527886.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.7273capra_hircusENSCHIP0000000661187.750685.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545capra_hircusENSCHIP0000002160187.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365249.545547.7273oryctolagus_cuniculusENSOCUP0000004168980.442877.4908
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818oryctolagus_cuniculusENSOCUP0000002517587.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365284.545582.7273oryctolagus_cuniculusENSOCUP0000002359185.125983.2952
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365288.636486.5909camelus_dromedariusENSCDRP0000501926586.859784.8552
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818ailuropoda_melanoleucaENSAMEP0000001979987.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545delphinapterus_leucasENSDLEP0000000223887.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545tursiops_truncatusENSTTRP0000001212887.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.4091homo_sapiensENSP0000036192787.750686.637
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365273.409172.0455mandrillus_leucophaeusENSMLEP0000003501790.985989.2958
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545physeter_catodonENSPCTP0000500918287.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.9545panthera_pardusENSPPRP0000001964887.527886.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818mustela_putorius_furoENSMPUP0000001901687.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818equus_caballusENSECAP0000006391387.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.9545panthera_leoENSPLOP0000002667687.527886.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.4091pongo_abeliiENSPPYP0000004504187.750686.637
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818ursus_maritimusENSUMAP0000001651087.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.5rattus_norvegicusENSRNOP0000008958187.527885.7461
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.9545cavia_porcellusENSCPOP0000001711287.527886.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.7273cricetulus_griseus_chok1gshdENSCGRP0000100653687.750685.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.7273procavia_capensisENSPCAP0000000308387.527885.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.7273mus_musculusENSMUSP0000010882887.750685.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545bos_indicus_hybridENSBIXP0000501179287.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.7273mus_spretusMGP_SPRETEiJ_P009644387.750685.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818ictidomys_tridecemlineatusENSSTOP0000001977687.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365264.772760.9091pan_troglodytesENSPTRP0000006297574.218869.7917
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.9545canis_lupus_familiarisENSCAFP0084502719187.527886.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.4091papio_anubisENSPANP0000002900087.750686.637
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545monodon_monocerosENSMMNP0001501499487.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.9545vulpes_vulpesENSVVUP0000000686787.527886.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365268.636465.4545octodon_degusENSODEP0000000958878.238374.6114
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545sus_scrofaENSSSCP0000007582487.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.090987.2727heterocephalus_glaber_femaleENSHGLP0000005362687.585.7143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365288.636487.2727dipodomys_ordiiENSDORP0000001948886.859785.5234
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.7273peromyscus_maniculatus_bairdiiENSPEMP0000002271687.750685.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.7273mus_caroliMGP_CAROLIEiJ_P009268187.750685.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545bos_taurusENSBTAP0000000986487.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818marmota_marmota_marmotaENSMMMP0000001775187.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818sorex_araneusENSSARP0000001282287.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.9545otolemur_garnettiiENSOGAP0000001556487.527886.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365249.545543.8636phascolarctos_cinereusENSPCIP0000003691968.338660.5016
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.090985.6818phascolarctos_cinereusENSPCIP000000097338076.9388
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.5nannospalax_galiliENSNGAP0000002127987.527885.7461
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365288.863687.5panthera_tigris_altaicaENSPTIP0000000047587.082485.7461
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545balaenoptera_musculusENSBMSP0001002792887.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545ovis_aries_rambouilletENSOARP0002002216487.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.7273microtus_ochrogasterENSMOCP0000001232587.750685.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365284.545583.6364rhinopithecus_bietiENSRBIP0000002983886.310985.3828
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818pteropus_vampyrusENSPVAP0000000148087.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545phocoena_sinusENSPSNP0000002764187.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365286.818285.2273bos_grunniensENSBGRP0000003136187.414285.8124
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545rhinolophus_ferrumequinumENSRFEP0001000147887.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.090987.7273myotis_lucifugusENSMLUP0000002061487.305185.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545moschus_moschiferusENSMMSP0000001782687.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365272.563.6364vombatus_ursinusENSVURP0001002895870.419461.8102
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.090985.6818vombatus_ursinusENSVURP0001000983983.050879.8729
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545urocitellus_parryiiENSUPAP0001001245487.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.7273mesocricetus_auratusENSMAUP0000000233687.750685.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318287.9545canis_lupus_dingoENSCAFP0002000910987.527886.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365268.636467.0455bison_bison_bisonENSBBBP0000002518367.260665.7016
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.7273mus_pahariMGP_PahariEiJ_P009029487.750685.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365254.772751.1364jaculus_jaculusENSJJAP0000000486175.786270.7547
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365279.772777.0455jaculus_jaculusENSJJAP0000001340482.978780.1418
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365288.409186.5909jaculus_jaculusENSJJAP0000000268986.63784.8552
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365275.227370.4545chinchilla_lanigeraENSCLAP0000002103080.731775.6098
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.090987.7273chinchilla_lanigeraENSCLAP0000000272587.305185.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818sciurus_vulgarisENSSVLP0000502245887.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545ochotona_princepsENSOPRP0000000729487.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.9545bos_mutusENSBMUP0000001514887.750686.1915
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545588.1818neovison_visonENSNVIP0000001859487.750686.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.545587.7273catagonus_wagneriENSCWAP0000002237087.750685.9688
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365289.318288.1818chlorocebus_sabaeusENSCSAP0000001793687.527886.4143
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365284.090980.6818cervus_hanglu_yarkandensisENSCHYP0000002487380.260377.0065
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365255.909154.3182prolemur_simusENSPSMP0000002968886.01483.5664
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365248.636437.7273ciona_intestinalisENSCINP0000000363258.630145.4795
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365265.227353.6364petromyzon_marinusENSPMAP0000000085560.805150
ENSMNEG00000016707macaca_nemestrinaENSMNEP000000036525543.1818eptatretus_burgeriENSEBUP0000001447667.409552.9248
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365261.136448.6364eptatretus_burgeriENSEBUP0000000371362.124749.4226
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365278.863671.5909latimeria_chalumnaeENSLACP0000002287878.153270.9459
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365274.772766.1364callorhinchus_miliiENSCMIP0000001309974.434465.8371
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365282.576.5909chrysemys_picta_belliiENSCPBP0000001262269.142964.1905
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365225.681822.5sphenodon_punctatusENSSPUP0000000312165.317957.2254
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365279.545574.0909crocodylus_porosusENSCPRP0000501668970.850265.9919
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365283.636477.7273laticauda_laticaudataENSLLTP0000001086472.298667.1906
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365283.636477.7273notechis_scutatusENSNSUP0000000016072.298667.1906
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365283.636477.7273pseudonaja_textilisENSPTXP0000001949272.298667.1906
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365282.272776.8182anas_platyrhynchos_platyrhynchosENSAPLP0000001009267.161462.7087
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365282.272776.5909gallus_gallusENSGALP0001002090568.560663.8258
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365282.272776.5909meleagris_gallopavoENSMGAP0000000747074.793469.6281
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365281.590975.9091serinus_canariaENSSCAP0000001569165.630761.0603
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365280.454573.8636parus_majorENSPMJP0000001040960.824755.8419
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365281.363675.9091geospiza_fortisENSGFOP0000000754872.177467.3387
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365283.636477.7273salvator_merianaeENSSMRP0000002225275.255669.9387
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365224.772718.4091naja_najaENSNNAP0000002315265.269548.503
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365282.045575.4545coturnix_japonicaENSCJPP0000500550469.556863.9692
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365282.954577.0455pelodiscus_sinensisENSPSIP0000000335170.873865.8252
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365282.576.5909chelonoidis_abingdoniiENSCABP0000001798069.142964.1905
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365241.136435.4545tetraodon_nigroviridisENSTNIP0000001185169.884260.2317
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365279.772773.4091ficedula_albicollisENSFALP0000003075262.903257.8853
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365283.636477.7273podarcis_muralisENSPMRP0000000904575.255669.9387
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365282.272776.3636gopherus_evgoodeiENSGEVP0000500651568.952464
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365277.272771.3636anser_brachyrhynchusENSABRP0000000065971.578966.1053
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365282.576.5909terrapene_carolina_triunguisENSTMTP0000003028669.142964.1905
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365283.409177.7273struthio_camelus_australisENSSCUP0000000392571.262166.4078
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365278.636473.8636strigops_habroptilaENSSHBP0000500957268.514964.3564
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365282.272776.8182aquila_chrysaetos_chrysaetosENSACCP0002002206369.749565.1252
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365281.590975.9091taeniopygia_guttataENSTGUP0000002898963.204258.8028
ENSMNEG00000016707macaca_nemestrinaENSMNEP0000000365277.045568.6364leptobrachium_leishanenseENSLLEP0000003527873.695765.6522

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression