RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMMUG00000061711	Gene ID		Accession	-
Symbol	MRPL53	Alias	-	Full Name	mitochondrial ribosomal protein L53
Status	Confidence	Length	2843 bases	Strand	Plus strand
Position	13 : 34343220 - 34346062	RNA binding domain	MRP_L53
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMMUP00000076855	MRP_L53	PF10780	1.9e-14	1
ENSMMUP00000077929	MRP_L53	PF10780	1.9e-14	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
MRPL53-201	ENSMMUT00000106918	1646	176aa	ENSMMUP00000076855
MRPL53-202	ENSMMUT00000085450	2635	176aa	ENSMMUP00000077929

Gene Model

Click here to download ENSMMUG00000061711's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMMUG00000061711's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMUG00000061711

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	54.5455	41.4773	ornithorhynchus_anatinus	ENSOANP00000038607	43.0493	32.7354
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	48.2955	41.4773	notamacropus_eugenii	ENSMEUP00000008132	80.1887	68.8679
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	53.9773	51.1364	dasypus_novemcinctus	ENSDNOP00000027389	86.3636	81.8182
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	57.9545	53.9773	echinops_telfairi	ENSETEP00000010200	90.2655	84.0708
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	61.3636	56.25	callithrix_jacchus	ENSCJAP00000056369	96.4286	88.3929
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	63.6364	63.6364	cercocebus_atys	ENSCATP00000002128	100	100
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	100	100	macaca_fascicularis	ENSMFAP00000005984	100	100
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	63.6364	63.6364	macaca_nemestrina	ENSMNEP00000034349	100	100
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	56.25	vulpes_vulpes	ENSVVUP00000005709	92.8571	88.3929
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	62.5	60.7955	gorilla_gorilla	ENSGGOP00000006363	98.2143	95.5357
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	58.5227	56.8182	ovis_aries_rambouillet	ENSOARP00020002199	91.9643	89.2857
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	55.1136	mesocricetus_auratus	ENSMAUP00000009464	87.395	81.5126
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	63.0682	63.0682	mandrillus_leucophaeus	ENSMLEP00000015927	99.1071	99.1071
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	62.5	60.7955	pan_troglodytes	ENSPTRP00000062041	98.2143	95.5357
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	57.3864	53.9773	marmota_marmota_marmota	ENSMMMP00000004530	90.1786	84.8214
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	58.5227	55.1136	marmota_marmota_marmota	ENSMMMP00000005175	91.9643	86.6071
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	46.0227	42.0455	ursus_americanus	ENSUAMP00000028086	67.5	61.6667
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	58.5227	56.25	felis_catus	ENSFCAP00000029046	91.9643	88.3929
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	56.8182	bos_taurus	ENSBTAP00000022082	92.8571	89.2857
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	55.1136	51.1364	heterocephalus_glaber_female	ENSHGLP00000046437	86.6071	80.3571
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	57.3864	53.4091	mus_pahari	MGP_PahariEiJ_P0050589	85.5932	79.661
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	56.8182	53.4091	mus_spicilegus	ENSMSIP00000037912	84.7458	79.661
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	46.0227	39.7727	vombatus_ursinus	ENSVURP00010026390	79.4118	68.6274
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	56.8182	balaenoptera_musculus	ENSBMSP00010017903	92.8571	89.2857
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	56.25	ailuropoda_melanoleuca	ENSAMEP00000018206	92.8571	88.3929
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	56.8182	53.4091	mus_spretus	MGP_SPRETEiJ_P0077412	84.7458	79.661
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	57.3864	53.9773	sorex_araneus	ENSSARP00000009641	89.3805	84.0708
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	57.9545	55.1136	urocitellus_parryii	ENSUPAP00010021041	91.0714	86.6071
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	78.4091	73.2955	equus_asinus	ENSEASP00005054452	74.5946	69.7297
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	50	47.7273	loxodonta_africana	ENSLAFP00000006699	88.8889	84.8485
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	57.3864	53.9773	chinchilla_lanigera	ENSCLAP00000007458	90.1786	84.8214
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	55.1136	51.7045	tupaia_belangeri	ENSTBEP00000015382	95.098	89.2157
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	60.7955	58.5227	otolemur_garnettii	ENSOGAP00000000945	95.5357	91.9643
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	57.9545	54.5455	mus_caroli	MGP_CAROLIEiJ_P0074518	86.4407	81.3559
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	61.9318	60.2273	homo_sapiens	ENSP00000258105	97.3214	94.6429
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	56.25	52.2727	jaculus_jaculus	ENSJJAP00000007128	88.3929	82.1429
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	58.5227	56.25	panthera_pardus	ENSPPRP00000015467	91.9643	88.3929
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	63.6364	63.0682	chlorocebus_sabaeus	ENSCSAP00000011700	100	99.1071
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	56.25	camelus_dromedarius	ENSCDRP00005009121	73.2394	69.7183
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	57.3864	52.2727	cricetulus_griseus_chok1gshd	ENSCGRP00001010744	84.8739	77.3109
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	63.6364	63.6364	papio_anubis	ENSPANP00000023559	100	100
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	56.25	bison_bison_bison	ENSBBBP00000012936	92.8571	88.3929
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.6591	56.25	oryctolagus_cuniculus	ENSOCUP00000013178	92.9204	87.6106
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	53.9773	51.1364	oryctolagus_cuniculus	ENSOCUP00000045773	86.3636	81.8182
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	56.8182	53.4091	mus_musculus	ENSMUSP00000109571	84.7458	79.661
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	48.2955	44.8864	capra_hircus	ENSCHIP00000022926	78.7037	73.1481
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	55.1136	52.8409	capra_hircus	ENSCHIP00000023769	75.7812	72.6562
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	58.5227	57.3864	capra_hircus	ENSCHIP00000005305	91.9643	90.1786
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	61.3636	56.25	aotus_nancymaae	ENSANAP00000028953	96.4286	88.3929
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	55.1136	microtus_ochrogaster	ENSMOCP00000016196	88.1356	82.2034
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.6591	57.9545	tursiops_truncatus	ENSTTRP00000012066	93.75	91.0714
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	57.3864	monodon_monoceros	ENSMMNP00015010581	92.8571	90.1786
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	58.5227	55.1136	ictidomys_tridecemlineatus	ENSSTOP00000000918	91.9643	86.6071
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	58.5227	56.25	panthera_leo	ENSPLOP00000008568	91.9643	88.3929
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	48.8636	44.8864	bos_mutus	ENSBMUP00000017109	56.5789	51.9737
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	56.8182	mustela_putorius_furo	ENSMPUP00000007997	92.8571	89.2857
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	57.9545	55.1136	sciurus_vulgaris	ENSSVLP00005031427	91.0714	86.6071
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	60.2273	56.25	saimiri_boliviensis_boliviensis	ENSSBOP00000020739	94.6429	88.3929
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	55.6818	propithecus_coquereli	ENSPCOP00000031795	92.8571	87.5
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.6591	56.25	microcebus_murinus	ENSMICP00000049178	93.75	88.3929
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	56.25	52.2727	cavia_porcellus	ENSCPOP00000023137	88.3929	82.1429
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.6591	57.3864	carlito_syrichta	ENSTSYP00000020721	93.75	90.1786
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	51.7045	47.1591	carlito_syrichta	ENSTSYP00000018517	71.0938	64.8438
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.6591	57.9545	phocoena_sinus	ENSPSNP00000020469	93.75	91.0714
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	56.8182	55.1136	cervus_hanglu_yarkandensis	ENSCHYP00000011662	89.2857	86.6071
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	72.7273	68.1818	neovison_vison	ENSNVIP00000026153	53.5565	50.2092
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	46.5909	39.7727	phascolarctos_cinereus	ENSPCIP00000007115	76.6355	65.4206
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	57.9545	56.25	panthera_tigris_altaica	ENSPTIP00000011118	91.0714	88.3929
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	61.9318	60.7955	nomascus_leucogenys	ENSNLEP00000027555	97.3214	95.5357
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.6591	57.3864	prolemur_simus	ENSPSMP00000029305	93.75	90.1786
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	56.8182	pteropus_vampyrus	ENSPVAP00000013162	92.8571	89.2857
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	45.4545	43.1818	catagonus_wagneri	ENSCWAP00000022868	66.6667	63.3333
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	46.0227	42.0455	ursus_maritimus	ENSUMAP00000001702	67.5	61.6667
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	56.25	52.8409	myotis_lucifugus	ENSMLUP00000002407	89.1892	83.7838
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	56.8182	canis_lupus_dingo	ENSCAFP00020017568	92.8571	89.2857
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	57.9545	53.9773	peromyscus_maniculatus_bairdii	ENSPEMP00000006529	84.2975	78.5124
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	54.5455	52.2727	procavia_capensis	ENSPCAP00000015734	85.7143	82.1429
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	59.0909	56.8182	bos_grunniens	ENSBGRP00000011377	92.8571	89.2857
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	58.5227	56.8182	moschus_moschiferus	ENSMMSP00000019993	91.9643	89.2857
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	43.75	38.0682	moschus_moschiferus	ENSMMSP00000019767	71.2963	62.037
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	62.5	60.7955	pan_paniscus	ENSPPAP00000013445	98.2143	95.5357
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	66.4773	61.9318	rhinolophus_ferrumequinum	ENSRFEP00010010765	81.8182	76.2238
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	58.5227	55.6818	nannospalax_galili	ENSNGAP00000001414	88.7931	84.4828
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	61.3636	56.8182	cebus_imitator	ENSCCAP00000015895	96.4286	89.2857
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	60.7955	59.6591	rhinopithecus_roxellana	ENSRROP00000045542	95.5357	93.75
ENSMMUG00000061711	macaca_mulatta	ENSMMUP00000077929	61.3636	60.2273	rhinopithecus_bieti	ENSRBIP00000002716	96.4286	94.6429

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression