RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSMMOG00000013209	Gene ID		Accession	-
Symbol		Alias	-	Full Name	LSM14A mRNA processing body assembly factor a
Status	Confidence	Length	7767 bases	Strand	Plus strand
Position	KV751377.1 : 2632778 - 2640544	RNA binding domain	LSM14 , SM-ATX , FDF
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMMOP00000017385	LSM14	PF12701	6.4e-30	1
ENSMMOP00000017385	SM-ATX	PF14438	1.1e-07	2
ENSMMOP00000017385	FDF	PF09532	1.2e-18	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMMOT00000017673	1269	422aa	ENSMMOP00000017385

Gene Model

Click here to download ENSMMOG00000013209's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMMOG00000013209's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMOG00000013209

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMOG00000013209

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression