RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMMMG00000024013	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	207 bases	Strand	Minus strand
Position	CZRN01000071.1 : 6309926 - 6310132	RNA binding domain	Ribosomal_L37ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMMMP00000027505	Ribosomal_L37ae	PF01780	6.4e-33	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMMMT00000031109	207	68aa	ENSMMMP00000027505

Gene Model

Click here to download ENSMMMG00000024013's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMMMG00000024013's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000025327	66.6667	60	marmota_marmota_marmota	ENSMMMP00000027505	58.8235	52.9412
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000018196	58.3333	55.2083	marmota_marmota_marmota	ENSMMMP00000027505	82.3529	77.9412
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000024211	57.3529	57.3529	marmota_marmota_marmota	ENSMMMP00000027505	57.3529	57.3529
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000006956	58.6957	56.5217	marmota_marmota_marmota	ENSMMMP00000027505	79.4118	76.4706
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000026334	52.1368	49.5727	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	85.2941
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000011216	58.8235	54.4118	marmota_marmota_marmota	ENSMMMP00000027505	58.8235	54.4118
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000020338	67.3913	65.2174	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	88.2353	sarcophilus_harrisii	ENSSHAP00000041769	53.9823	53.0973
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	57.3529	57.3529	cercocebus_atys	ENSCATP00000038184	60	60
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	57.3529	57.3529	macaca_fascicularis	ENSMFAP00000012481	60	60
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	57.3529	57.3529	papio_anubis	ENSPANP00000040989	60	60
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	57.3529	57.3529	mandrillus_leucophaeus	ENSMLEP00000016290	62.9032	62.9032
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	76.4706	72.0588	pan_troglodytes	ENSPTRP00000093619	67.5325	63.6364
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	57.3529	55.8824	canis_lupus_familiaris	ENSCAFP00845000393	69.6429	67.8571
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	82.3529	77.9412	vulpes_vulpes	ENSVVUP00000022321	70.8861	67.0886
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	55.8824	54.4118	vulpes_vulpes	ENSVVUP00000022158	66.6667	64.9123
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	80.8824	73.5294	ursus_americanus	ENSUAMP00000009577	63.9535	58.1395
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353	ailuropoda_melanoleuca	ENSAMEP00000024358	67.3913	65.2174
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	55.8824	55.8824	delphinapterus_leucas	ENSDLEP00000014993	41.7582	41.7582
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	82.3529	balaenoptera_musculus	ENSBMSP00010030043	56.0748	52.3364
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	88.2353	loxodonta_africana	ENSLAFP00000024159	67.033	65.9341
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	83.8235	camelus_dromedarius	ENSCDRP00005012900	81.0811	77.027
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	85.2941	camelus_dromedarius	ENSCDRP00005013843	78.2051	74.359
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	76.4706	64.7059	bos_taurus	ENSBTAP00000070827	59.0909	50
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	ovis_aries_rambouillet	ENSOARP00020009900	70.1149	67.8161
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	ovis_aries_rambouillet	ENSOARP00020023040	74.3902	71.9512
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	92.6471	91.1765	urocitellus_parryii	ENSUPAP00010008954	74.1176	72.9412
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	60.2941	60.2941	vombatus_ursinus	ENSVURP00010007492	65.0794	65.0794
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	60.2941	60.2941	phocoena_sinus	ENSPSNP00000000190	48.2353	48.2353
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	85.2941	79.4118	saimiri_boliviensis_boliviensis	ENSSBOP00000007541	77.3333	72
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	80.8824	73.5294	cavia_porcellus	ENSCPOP00000027907	50.4587	45.8716
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	88.2353	pteropus_vampyrus	ENSPVAP00000005767	67.033	65.9341
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	85.2941	77.9412	peromyscus_maniculatus_bairdii	ENSPEMP00000033474	71.6049	65.4321
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	microtus_ochrogaster	ENSMOCP00000002350	63.5417	61.4583
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	88.2353	microcebus_murinus	ENSMICP00000038552	63.5417	62.5
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	83.8235	80.8824	moschus_moschiferus	ENSMMSP00000009403	85.0746	82.0896
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	77.9412	69.1176	carlito_syrichta	ENSTSYP00000025938	67.9487	60.2564
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	85.2941	cervus_hanglu_yarkandensis	ENSCHYP00000023303	76.9231	74.359
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	88.2353	prolemur_simus	ENSPSMP00000035209	63.5417	62.5
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	72.0588	63.2353	mus_spicilegus	ENSMSIP00000030271	69.0141	60.5634
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	64.7059	60.2941	mus_spicilegus	ENSMSIP00000001535	72.1311	67.2131
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	61.7647	55.8824	bison_bison_bison	ENSBBBP00000000291	43.299	39.1753
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	85.2941	rattus_norvegicus	ENSRNOP00000091160	83.5616	79.4521
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	64.7059	58.8235	monodelphis_domestica	ENSMODP00000042208	65.6716	59.7015
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	86.7647	80.8824	jaculus_jaculus	ENSJJAP00000017735	58.4158	54.4554
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	86.7647	83.8235	catagonus_wagneri	ENSCWAP00000016301	71.0843	68.6747
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	58.8235	55.8824	sciurus_vulgaris	ENSSVLP00005023145	57.1429	54.2857
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	76.4706	64.7059	bos_indicus_hybrid	ENSBIXP00005007715	59.0909	50
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	69.1176	61.7647	canis_lupus_dingo	ENSCAFP00020013361	79.661	71.1864
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	73.5294	64.7059	canis_lupus_dingo	ENSCAFP00020018196	73.5294	64.7059
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	cebus_imitator	ENSCCAP00000028452	71.7647	69.4118
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	75	63.2353	bos_mutus	ENSBMUP00000020382	58.6207	49.4253
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	58.8235	54.4118	propithecus_coquereli	ENSPCOP00000013207	52.6316	48.6842
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353	petromyzon_marinus	ENSPMAP00000000001	67.3913	65.2174
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	80.8824	eptatretus_burgeri	ENSEBUP00000008712	49.1803	45.082
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	callorhinchus_milii	ENSCMIP00000038383	29.902	28.9216
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	latimeria_chalumnae	ENSLACP00000013146	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353	clupea_harengus	ENSCHAP00000043701	57.4074	55.5556
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	86.7647	danio_rerio	ENSDARP00000149337	67.3913	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353	carassius_auratus	ENSCARP00000007525	67.3913	65.2174
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	carassius_auratus	ENSCARP00000020048	62.2449	60.2041
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	carassius_auratus	ENSCARP00000127999	62.2449	60.2041
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	85.2941	astyanax_mexicanus	ENSAMXP00000044376	65.2174	63.0435
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353	ictalurus_punctatus	ENSIPUP00000032395	67.3913	65.2174
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	electrophorus_electricus	ENSEEEP00000002593	64.2105	62.1053
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353	esox_lucius	ENSELUP00000034166	67.3913	65.2174
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353	salmo_salar	ENSSSAP00000168002	14.0271	13.5747
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	88.2353	gadus_morhua	ENSGMOP00000047570	66.3043	65.2174
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	86.7647	fundulus_heteroclitus	ENSFHEP00000016949	65.2174	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	86.7647	poecilia_reticulata	ENSPREP00000031565	63.8298	62.766
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	86.7647	oryzias_latipes	ENSORLP00000014370	66.6667	65.5556
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	xiphophorus_maculatus	ENSXMAP00000022527	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353	cyclopterus_lumpus	ENSCLMP00005030659	67.3913	65.2174
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	58.8235	58.8235	oreochromis_niloticus	ENSONIP00000032425	58.8235	58.8235
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	astatotilapia_calliptera	ENSACLP00000026553	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	86.7647	haplochromis_burtoni	ENSHBUP00000034754	66.6667	65.5556
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	83.8235	80.8824	sparus_aurata	ENSSAUP00010064465	61.9565	59.7826
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	lates_calcarifer	ENSLCAP00010008751	58.6538	56.7308
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	75	64.7059	xenopus_tropicalis	ENSXETP00000067902	63.75	55
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	60.2941	58.8235	chrysemys_picta_bellii	ENSCPBP00000037712	64.0625	62.5
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	86.7647	pygocentrus_nattereri	ENSPNAP00000001238	39.2405	37.3418
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	cyprinodon_variegatus	ENSCVAP00000013185	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353	acanthochromis_polyacanthus	ENSAPOP00000026370	67.3913	65.2174
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	sander_lucioperca	ENSSLUP00000008945	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	neolamprologus_brichardi	ENSNBRP00000020778	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	83.8235	79.4118	naja_naja	ENSNNAP00000006425	71.25	67.5
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	cottoperca_gobio	ENSCGOP00000025482	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	seriola_dumerili	ENSSDUP00000002450	67.033	64.8352
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	60.2941	58.8235	podarcis_muralis	ENSPMRP00000016028	57.7465	56.338
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	57.3529	55.8824	podarcis_muralis	ENSPMRP00000006008	63.9344	62.2951
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	58.8235	58.8235	nothobranchius_furzeri	ENSNFUP00015025358	58.8235	58.8235
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	pundamilia_nyererei	ENSPNYP00000022426	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	oryzias_melastigma	ENSOMEP00000028375	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	oryzias_sinensis	ENSOSIP00000014190	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	88.2353	denticeps_clupeoides	ENSDCDP00000000987	63.5417	62.5
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	58.8235	58.8235	anabas_testudineus	ENSATEP00000054710	58.8235	58.8235
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	86.7647	amphiprion_ocellaris	ENSAOCP00000023850	40.8163	40.1361
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	86.7647	dicentrarchus_labrax	ENSDLAP00005057152	70.5882	69.4118
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353	hippocampus_comes	ENSHCOP00000011939	67.3913	65.2174
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	poecilia_formosa	ENSPFOP00000014682	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	86.7647	larimichthys_crocea	ENSLCRP00005034140	65.2174	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	85.2941	betta_splendens	ENSBSLP00000050988	65.2174	63.0435
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	85.2941	tetraodon_nigroviridis	ENSTNIP00000010730	66.3043	63.0435
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	80.8824	75	anolis_carolinensis	ENSACAP00000005447	60.4396	56.044
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	88.2353	oncorhynchus_tshawytscha	ENSOTSP00005079885	79.2208	77.9221
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	stegastes_partitus	ENSSPAP00000004318	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	seriola_lalandi_dorsalis	ENSSLDP00000005195	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	88.2353	myripristis_murdjan	ENSMMDP00005031860	67.3913	65.2174
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	85.2941	cynoglossus_semilaevis	ENSCSEP00000013732	65.2174	63.0435
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	86.7647	maylandia_zebra	ENSMZEP00005014902	66.6667	65.5556
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	86.7647	amphiprion_percula	ENSAPEP00000030792	40.2685	39.5973
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	poecilia_latipinna	ENSPLAP00000016918	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	88.2353	hucho_hucho	ENSHHUP00000068733	84.7222	83.3333
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	91.1765	86.7647	sinocyclocheilus_grahami	ENSSGRP00000067018	67.3913	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	86.7647	scophthalmus_maximus	ENSSMAP00000021009	63.1579	62.1053
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	gasterosteus_aculeatus	ENSGACP00000016501	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	oryzias_javanicus	ENSOJAP00000027733	66.3043	64.1304
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	88.2353	86.7647	mastacembelus_armatus	ENSMAMP00000047072	37.5	36.875
ENSMMMG00000024013	marmota_marmota_marmota	ENSMMMP00000027505	89.7059	86.7647	labrus_bergylta	ENSLBEP00000005568	49.5935	47.9675

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression