RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMMMG00000013861	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4252 bases	Strand	Minus strand
Position	CZRN01000012.1 : 4180 - 8431	RNA binding domain	APOBEC_N , APOBEC_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMMMP00000015540	APOBEC_N	PF08210	2.4e-41	1
ENSMMMP00000015540	APOBEC_C	PF05240	4.9e-21	2
ENSMMMP00000015544	APOBEC_N	PF08210	1.9e-35	1
ENSMMMP00000015544	APOBEC_C	PF05240	5.1e-21	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMMMT00000017722	976	232aa	ENSMMMP00000015540
-	ENSMMMT00000017726	702	220aa	ENSMMMP00000015544

Gene Model

Click here to download ENSMMMG00000013861's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMMMG00000013861's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015822	48.4848	29.798	marmota_marmota_marmota	ENSMMMP00000015540	41.3793	25.431
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015611	38.6139	22.2772	marmota_marmota_marmota	ENSMMMP00000015540	33.6207	19.3966
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015806	38.6957	21.3043	marmota_marmota_marmota	ENSMMMP00000015540	38.3621	21.1207
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000028055	36.1607	20.9821	marmota_marmota_marmota	ENSMMMP00000015540	34.9138	20.2586

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	37.069	18.5345	sarcophilus_harrisii	ENSSHAP00000043123	29.8611	14.9306
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.8793	40.0862	callithrix_jacchus	ENSCJAP00000073454	60.9756	45.3659
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	51.2931	37.931	cercocebus_atys	ENSCATP00000012268	59.799	44.2211
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	54.3103	40.5172	macaca_fascicularis	ENSMFAP00000017385	60	44.7619
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	52.5862	40.5172	macaca_mulatta	ENSMMUP00000053576	46.9231	36.1538
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.8793	40.5172	macaca_nemestrina	ENSMNEP00000031743	59.2417	44.5498
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	46.5517	33.1897	papio_anubis	ENSPANP00000048484	44.4444	31.6872
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.4483	39.6552	mandrillus_leucophaeus	ENSMLEP00000018470	58.7678	43.6019
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	50.8621	38.7931	pan_paniscus	ENSPPAP00000026886	59	45
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	50.8621	38.7931	pan_troglodytes	ENSPTRP00000083401	59	45
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.4483	40.5172	pongo_abelii	ENSPPYP00000041270	58.7678	44.5498
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	49.1379	37.5	homo_sapiens	ENSP00000411754	62.2951	47.541
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.8793	39.6552	canis_lupus_familiaris	ENSCAFP00845030766	50	36.8
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.4483	40.0862	vulpes_vulpes	ENSVVUP00000019753	41.196	30.897
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	55.1724	41.8103	ursus_americanus	ENSUAMP00000004881	57.9186	43.8914
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	57.3276	45.6897	ailuropoda_melanoleuca	ENSAMEP00000011384	53.2	42.4
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	56.0345	44.8276	mustela_putorius_furo	ENSMPUP00000013141	33.9426	27.154
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	56.8966	42.6724	felis_catus	ENSFCAP00000059112	41.3793	31.0345
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	57.3276	42.2414	panthera_pardus	ENSPPRP00000009485	68.5567	50.5155
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	50.8621	40.0862	tursiops_truncatus	ENSTTRP00000001189	66.2921	52.2472
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.8793	43.1034	delphinapterus_leucas	ENSDLEP00000014878	23.4082	18.7266
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	56.8966	42.6724	physeter_catodon	ENSPCTP00005011753	31.4286	23.5714
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	51.7241	40.0862	balaenoptera_musculus	ENSBMSP00010013875	66.6667	51.6667
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.4483	38.7931	equus_asinus	ENSEASP00005036918	39.8714	28.9389
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	51.2931	32.7586	loxodonta_africana	ENSLAFP00000026875	32.337	20.6522
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.8793	38.7931	equus_caballus	ENSECAP00000034895	50.4032	36.2903
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	44.3966	30.6034	procavia_capensis	ENSPCAP00000014600	59.1954	40.8046
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	55.6034	40.5172	camelus_dromedarius	ENSCDRP00005019466	30.4965	22.2222
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	54.7414	43.1034	sus_scrofa	ENSSSCP00000049864	52.2634	41.1523
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.0172	40.5172	bos_taurus	ENSBTAP00000003115	31.9481	24.4156
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.4483	39.6552	capra_hircus	ENSCHIP00000032712	33.1551	24.5989
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.4483	40.0862	ovis_aries_rambouillet	ENSOARP00020015068	33.3333	25
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	50.8621	35.7759	mus_pahari	MGP_PahariEiJ_P0042359	26.6366	18.7359
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	46.1207	34.4828	oryctolagus_cuniculus	ENSOCUP00000035226	21.063	15.748
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	56.0345	42.6724	ursus_maritimus	ENSUMAP00000019740	61.6114	46.9194
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	48.2759	34.4828	mus_caroli	MGP_CAROLIEiJ_P0039006	25.4545	18.1818
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	52.5862	38.7931	cricetulus_griseus_chok1gshd	ENSCGRP00001025355	29.54	21.7918
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	56.0345	40.9483	heterocephalus_glaber_female	ENSHGLP00000024290	62.8019	45.8937
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	65.9483	61.2069	urocitellus_parryii	ENSUPAP00010028216	71.1628	66.0465
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	38.7931	20.2586	phascolarctos_cinereus	ENSPCIP00000049844	34.6154	18.0769
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	39.2241	20.6897	vombatus_ursinus	ENSVURP00010031524	30.5369	16.1074
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	54.3103	41.8103	phocoena_sinus	ENSPSNP00000013086	30.2158	23.2614
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	52.1552	38.7931	dipodomys_ordii	ENSDORP00000022770	31.8421	23.6842
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	50.8621	38.7931	saimiri_boliviensis_boliviensis	ENSSBOP00000027153	49.789	37.9747
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	54.7414	41.8103	cavia_porcellus	ENSCPOP00000008311	30.9756	23.6585
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	50.8621	38.3621	pteropus_vampyrus	ENSPVAP00000008916	67.0455	50.5682
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.4483	38.7931	peromyscus_maniculatus_bairdii	ENSPEMP00000000666	28.3753	20.595
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	51.7241	40.0862	microtus_ochrogaster	ENSMOCP00000025473	28.5714	22.1429
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.4483	41.3793	chlorocebus_sabaeus	ENSCSAP00000002661	58.7678	45.4976
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	38.7931	26.7241	vicugna_pacos	ENSVPAP00000010345	70.8661	48.8189
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	54.3103	40.5172	aotus_nancymaae	ENSANAP00000015030	56.25	41.9643
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.4483	39.6552	moschus_moschiferus	ENSMMSP00000021032	33.3333	24.7312
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	47.8448	37.069	carlito_syrichta	ENSTSYP00000023224	61.326	47.5138
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	54.3103	40.9483	nomascus_leucogenys	ENSNLEP00000018472	59.7156	45.0237
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.8793	40.9483	cervus_hanglu_yarkandensis	ENSCHYP00000021689	26.3713	20.0422
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	55.6034	39.2241	rhinolophus_ferrumequinum	ENSRFEP00010002311	60.2804	42.5234
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	47.4138	34.9138	mus_musculus	ENSMUSP00000135027	25	18.4091
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	47.8448	35.3448	mus_spicilegus	ENSMSIP00000034718	25.2273	18.6364
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	0	0	bison_bison_bison	ENSBBBP00000011591	0	0
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	52.1552	39.6552	bison_bison_bison	ENSBBBP00000011581	68.75	52.2727
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	52.5862	37.5	rattus_norvegicus	ENSRNOP00000095626	27.4775	19.5946
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	54.3103	42.2414	rhinopithecus_roxellana	ENSRROP00000006181	54.7826	42.6087
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	39.2241	18.5345	monodelphis_domestica	ENSMODP00000040505	35	16.5385
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	45.2586	32.3276	jaculus_jaculus	ENSJJAP00000014377	28.4553	20.3252
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	50.8621	41.8103	catagonus_wagneri	ENSCWAP00000020400	29.6482	24.3719
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	51.2931	37.5	nannospalax_galili	ENSNGAP00000019083	28.401	20.7637
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	50.431	40.9483	sciurus_vulgaris	ENSSVLP00005019455	25.4348	20.6522
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	56.0345	43.1034	bos_indicus_hybrid	ENSBIXP00005043951	32.8283	25.2525
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	50	40.5172	tupaia_belangeri	ENSTBEP00000001321	69.4611	56.2874
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	57.3276	42.2414	panthera_tigris_altaica	ENSPTIP00000009121	68.5567	50.5155
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	54.7414	42.2414	bos_grunniens	ENSBGRP00000004947	51.8367	40
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	47.8448	34.4828	mus_spretus	MGP_SPRETEiJ_P0040813	25.2273	18.1818
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.0172	38.7931	mesocricetus_auratus	ENSMAUP00000010970	29.7821	21.7918
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.8793	43.1034	monodon_monoceros	ENSMMNP00015027558	24.5098	19.6078
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.0172	38.7931	canis_lupus_dingo	ENSCAFP00020003085	57.7465	42.2535
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.4483	39.6552	cebus_imitator	ENSCCAP00000001319	58.216	43.1925
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	52.5862	40.0862	bos_mutus	ENSBMUP00000000416	31.6883	24.1558
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	51.7241	39.6552	chinchilla_lanigera	ENSCLAP00000024206	59.4059	45.5446
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	54.3103	44.8276	neovison_vison	ENSNVIP00000001830	61.7647	50.9804
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	53.4483	41.8103	rhinopithecus_bieti	ENSRBIP00000010473	58.7678	45.9716
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	81.8966	79.7414	ictidomys_tridecemlineatus	ENSSTOP00000006364	91.3462	88.9423
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	35.7759	21.1207	callorhinchus_milii	ENSCMIP00000004961	39.5238	23.3333
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	37.5	23.7069	latimeria_chalumnae	ENSLACP00000018020	25.2907	15.9884
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	38.7931	21.9828	lepisosteus_oculatus	ENSLOCP00000004258	32.967	18.6813
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	34.4828	19.8276	xenopus_tropicalis	ENSXETP00000073758	36.036	20.7207
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	35.3448	22.4138	erpetoichthys_calabaricus	ENSECRP00000021015	31.4176	19.9234
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	26.7241	14.2241	podarcis_muralis	ENSPMRP00000035742	29.5238	15.7143
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	34.9138	21.5517	paramormyrops_kingsleyae	ENSPKIP00000029857	39.1304	24.1546
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	38.7931	19.8276	anolis_carolinensis	ENSACAP00000018261	33.4572	17.1004
ENSMMMG00000013861	marmota_marmota_marmota	ENSMMMP00000015540	34.9138	21.9828	scleropages_formosus	ENSSFOP00015009596	40.9091	25.7576

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression