RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMMDG00005021310	Gene ID	115378897	Accession	-
Symbol		Alias	-	Full Name	eukaryotic translation initiation factor 5A-1-like
Status	Confidence	Length	3273 bases	Strand	Plus strand
Position	20 : 5146062 - 5149334	RNA binding domain	eIF-5a
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMMDP00005046646	eIF-5a	PF01287	8e-26	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMMDT00005047572	1505	155aa	ENSMMDP00005046646

Gene Model

Click here to download ENSMMDG00005021310's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMMDG00005021310's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005008481	82.9114	67.0886	myripristis_murdjan	ENSMMDP00005046646	84.5161	68.3871
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005051926	61.5741	49.0741	myripristis_murdjan	ENSMMDP00005046646	85.8064	68.3871

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	75.4839	58.7097	caenorhabditis_elegans	F54C9.1.2	72.6708	56.5217
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	72.2581	55.4839	caenorhabditis_elegans	T05G5.10a.1	57.4359	44.1026
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	81.2903	62.5806	drosophila_melanogaster	FBpp0072082	79.2453	61.0063
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	83.871	71.6129	oncorhynchus_kisutch	ENSOKIP00005113223	59.0909	50.4545
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	89.6774	77.4194	oncorhynchus_kisutch	ENSOKIP00005032815	88.535	76.4331
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	49.0323	43.871	oncorhynchus_mykiss	ENSOMYP00000060615	82.6087	73.913
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	88.3871	76.7742	oncorhynchus_mykiss	ENSOMYP00000010319	64.0187	55.6075
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	58.7097	52.9032	salmo_salar	ENSSSAP00000035935	85.8491	77.3585
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	88.3871	76.7742	salmo_salar	ENSSSAP00000089479	83.0303	72.1212
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	89.6774	77.4194	salmo_salar	ENSSSAP00000115527	84.7561	73.1707
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	41.9355	38.7097	salmo_trutta	ENSSTUP00000000949	91.5493	84.507
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	89.6774	77.4194	salmo_trutta	ENSSTUP00000069324	84.7561	73.1707
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	88.3871	76.7742	salmo_trutta	ENSSTUP00000096501	87.2611	75.7962
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	85.8064	66.4516	gadus_morhua	ENSGMOP00000036611	50.9579	39.4636
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	69.0323	60.6452	fundulus_heteroclitus	ENSFHEP00000005850	67.2956	59.1195
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.2581	82.5806	poecilia_reticulata	ENSPREP00000016201	76.4706	68.4492
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	84.5161	74.8387	xiphophorus_maculatus	ENSXMAP00000027281	82.3899	72.956
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.2581	82.5806	oryzias_latipes	ENSORLP00000043691	66.2037	59.2593
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	91.6129	78.0645	cyclopterus_lumpus	ENSCLMP00005032920	91.0256	77.5641
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	85.1613	73.5484	oreochromis_niloticus	ENSONIP00000023864	84.0764	72.6115
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	93.5484	81.9355	haplochromis_burtoni	ENSHBUP00000016956	92.9487	81.4103
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	93.5484	81.9355	astatotilapia_calliptera	ENSACLP00000033511	92.9487	81.4103
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	91.6129	80.6452	lates_calcarifer	ENSLCAP00010054516	85.0299	74.8503
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	77.4194	70.3226	dicentrarchus_labrax	ENSDLAP00005024122	87.5912	79.562
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.9032	81.9355	cyprinodon_variegatus	ENSCVAP00000013032	92.3077	81.4103
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	85.8064	72.9032	takifugu_rubripes	ENSTRUP00000081023	82.6087	70.1863
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	83.871	74.1936	oryzias_melastigma	ENSOMEP00000005415	76.4706	67.6471
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	93.5484	81.9355	neolamprologus_brichardi	ENSNBRP00000012410	92.9487	81.4103
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	94.1936	80.6452	kryptolebias_marmoratus	ENSKMAP00000023594	93.5897	80.1282
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.9032	83.2258	seriola_dumerili	ENSSDUP00000004464	92.3077	82.6923
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.2581	82.5806	poecilia_formosa	ENSPFOP00000008694	91.6667	82.0513
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.2581	82.5806	poecilia_latipinna	ENSPLAP00000008230	91.6667	82.0513
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	90.3226	81.9355	scophthalmus_maximus	ENSSMAP00000068261	89.7436	81.4103
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	91.6129	80	cottoperca_gobio	ENSCGOP00000050912	69.9507	61.0837
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	90.9677	80	labrus_bergylta	ENSLBEP00000020255	65.2778	57.4074
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	88.3871	76.7742	hucho_hucho	ENSHHUP00000005976	65.8654	57.2115
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	89.6774	77.4194	hucho_hucho	ENSHHUP00000034310	82.2485	71.0059
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.9032	82.5806	amphilophus_citrinellus	ENSACIP00000022776	92.3077	82.0513
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	90.3226	78.0645	gasterosteus_aculeatus	ENSGACP00000016695	79.5455	68.75
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	32.9032	25.1613	acanthochromis_polyacanthus	ENSAPOP00000031505	75	57.3529
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.9032	81.9355	acanthochromis_polyacanthus	ENSAPOP00000021237	92.3077	81.4103
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	89.6774	77.4194	oncorhynchus_tshawytscha	ENSOTSP00005019442	62.6126	54.0541
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	88.3871	76.7742	oncorhynchus_tshawytscha	ENSOTSP00005077067	87.2611	75.7962
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	83.871	71.6129	oncorhynchus_tshawytscha	ENSOTSP00005093402	60.7477	51.8692
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.9032	82.5806	anabas_testudineus	ENSATEP00000031399	92.3077	82.0513
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	91.6129	77.4194	tetraodon_nigroviridis	ENSTNIP00000005114	91.0256	76.9231
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	93.5484	82.5806	amphiprion_ocellaris	ENSAOCP00000021219	92.9487	82.0513
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.9032	82.5806	nothobranchius_furzeri	ENSNFUP00015049605	67.9245	60.3774
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.2581	82.5806	oryzias_javanicus	ENSOJAP00000030856	91.6667	82.0513
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	90.3226	78.0645	hippocampus_comes	ENSHCOP00000012090	89.7436	77.5641
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.9032	83.2258	stegastes_partitus	ENSSPAP00000022423	92.3077	82.6923
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	93.5484	81.9355	maylandia_zebra	ENSMZEP00005017534	92.9487	81.4103
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	93.5484	81.2903	mastacembelus_armatus	ENSMAMP00000049769	85.7988	74.5562
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	91.6129	81.2903	betta_splendens	ENSBSLP00000048050	78.022	69.2308
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	93.5484	82.5806	amphiprion_percula	ENSAPEP00000005820	92.9487	82.0513
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.2581	82.5806	oryzias_sinensis	ENSOSIP00000000874	66.2037	59.2593
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	91.6129	78.0645	larimichthys_crocea	ENSLCRP00005040491	91.0256	77.5641
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	80	59.3548	saccharomyces_cerevisiae	YEL034W	78.9809	58.5987
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	80.6452	61.2903	saccharomyces_cerevisiae	YJR047C	79.6178	60.5096
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	90.3226	74.1936	cynoglossus_semilaevis	ENSCSEP00000024823	90.9091	74.6753
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	92.9032	83.2258	seriola_lalandi_dorsalis	ENSSLDP00000011823	92.3077	82.6923
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	93.5484	81.9355	pundamilia_nyererei	ENSPNYP00000017455	92.9487	81.4103
ENSMMDG00005021310	myripristis_murdjan	ENSMMDP00005046646	89.6774	78.7097	sander_lucioperca	ENSSLUP00000058617	89.1026	78.2051

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression