RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSMMDG00005020207 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
2273 bases |
Strand |
Plus strand |
Position |
6 : 7262261 - 7264533 |
RNA binding domain |
TPP1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSMMDP00005044001 |
TPP1 |
PF10341 |
9.1e-15 |
1 |
ENSMMDP00005044004 |
TPP1 |
PF10341 |
9.6e-15 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSMMDT00005044880 |
1284 |
427aa |
ENSMMDP00005044001 |
- |
ENSMMDT00005044883 |
1383 |
460aa |
ENSMMDP00005044004 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSMMDG00005020207 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 46.3043 | 29.7826 | clupea_harengus | ENSCHAP00000002451 | 30.6475 | 19.7122 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 58.6957 | 40.4348 | oncorhynchus_kisutch | ENSOKIP00005117012 | 45.3782 | 31.2605 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 56.7391 | 39.1304 | oncorhynchus_mykiss | ENSOMYP00000104989 | 43.5726 | 30.0501 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 58.6957 | 40.2174 | salmo_salar | ENSSSAP00000151515 | 46.1538 | 31.6239 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 58.4783 | 40 | salmo_trutta | ENSSTUP00000114517 | 45.9829 | 31.453 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 50.4348 | 36.9565 | gadus_morhua | ENSGMOP00000031162 | 53.8283 | 39.4432 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 56.9565 | 45.4348 | cyclopterus_lumpus | ENSCLMP00005011559 | 57.5824 | 45.9341 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 62.8261 | 48.4783 | sparus_aurata | ENSSAUP00010053742 | 52.2604 | 40.3255 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 49.7826 | 33.913 | oryzias_melastigma | ENSOMEP00000014409 | 52.8868 | 36.0277 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 48.913 | 33.2609 | oryzias_melastigma | ENSOMEP00000031204 | 51.1364 | 34.7727 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 50.2174 | 35 | kryptolebias_marmoratus | ENSKMAP00000013709 | 52.8604 | 36.8421 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 62.1739 | 48.6957 | seriola_dumerili | ENSSDUP00000004600 | 49.481 | 38.7543 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 56.5217 | 43.913 | scophthalmus_maximus | ENSSMAP00000000402 | 58.8235 | 45.7014 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 61.7391 | 46.9565 | cottoperca_gobio | ENSCGOP00000006045 | 51.9196 | 39.4881 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 54.3478 | 40.2174 | labrus_bergylta | ENSLBEP00000009703 | 55.8036 | 41.2946 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 22.8261 | 16.3043 | hucho_hucho | ENSHHUP00000034078 | 51.4706 | 36.7647 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 33.913 | 26.5217 | gasterosteus_aculeatus | ENSGACP00000003319 | 70.9091 | 55.4545 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 58.4783 | 40.2174 | oncorhynchus_tshawytscha | ENSOTSP00005035657 | 45.2101 | 31.0924 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 55.6522 | 39.3478 | amphiprion_ocellaris | ENSAOCP00000018238 | 51.927 | 36.714 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 49.5652 | 34.1304 | nothobranchius_furzeri | ENSNFUP00015047428 | 44.0154 | 30.3089 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 48.4783 | 31.7391 | hippocampus_comes | ENSHCOP00000013431 | 41.7603 | 27.3408 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 61.5217 | 46.7391 | stegastes_partitus | ENSSPAP00000022047 | 60.0849 | 45.6476 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 41.087 | 25.2174 | scleropages_formosus | ENSSFOP00015021932 | 34.2391 | 21.0145 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 40.2174 | 25 | scleropages_formosus | ENSSFOP00015017509 | 32.2862 | 20.0698 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 58.913 | 45.4348 | mastacembelus_armatus | ENSMAMP00000018114 | 54.9696 | 42.3935 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 55.2174 | 38.913 | amphiprion_percula | ENSAPEP00000008109 | 45.1155 | 31.794 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 59.1304 | 45.6522 | larimichthys_crocea | ENSLCRP00005063704 | 51.1278 | 39.4737 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 43.913 | 28.0435 | cynoglossus_semilaevis | ENSCSEP00000000372 | 36.7273 | 23.4545 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 63.0435 | 49.7826 | seriola_lalandi_dorsalis | ENSSLDP00000006249 | 50.6993 | 40.035 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 48.0435 | 30.4348 | paramormyrops_kingsleyae | ENSPKIP00000002900 | 40.5505 | 25.6881 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 33.913 | 20.6522 | denticeps_clupeoides | ENSDCDP00000054967 | 33.8395 | 20.6074 |
ENSMMDG00005020207 | myripristis_murdjan | ENSMMDP00005044004 | 62.1739 | 50.4348 | sander_lucioperca | ENSSLUP00000040065 | 47.2727 | 38.3471 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |