RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMMDG00005004696	Gene ID	115354147	Accession	-
Symbol		Alias	-	Full Name	eukaryotic translation initiation factor 5A-1-like
Status	Confidence	Length	6750 bases	Strand	Minus strand
Position	22 : 10445238 - 10451987	RNA binding domain	eIF-5a
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMMDP00005008481	eIF-5a	PF01287	7.2e-22	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMMDT00005008722	1584	158aa	ENSMMDP00005008481

Gene Model

Click here to download ENSMMDG00005004696's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMMDG00005004696's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005046646	84.5161	68.3871	myripristis_murdjan	ENSMMDP00005008481	82.9114	67.0886
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005051926	60.1852	47.2222	myripristis_murdjan	ENSMMDP00005008481	82.2785	64.557

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	74.6835	56.3291	caenorhabditis_elegans	F54C9.1.2	73.2919	55.2795
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	72.7848	53.1646	caenorhabditis_elegans	T05G5.10a.1	58.9744	43.0769
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	77.2152	59.4937	drosophila_melanogaster	FBpp0072082	76.7296	59.1195
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	82.9114	67.7215	fundulus_heteroclitus	ENSFHEP00000032194	80.8642	66.0494
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	61.3924	55.0633	poecilia_reticulata	ENSPREP00000018893	88.1818	79.0909
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	61.3924	55.0633	poecilia_reticulata	ENSPREP00000018870	88.1818	79.0909
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	85.443	70.8861	xiphophorus_maculatus	ENSXMAP00000009055	64.2857	53.3333
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	84.1772	70.8861	oryzias_latipes	ENSORLP00000042733	67.5127	56.8528
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	80.3797	67.7215	cyclopterus_lumpus	ENSCLMP00005019883	83.5526	70.3947
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.7089	73.4177	oreochromis_niloticus	ENSONIP00000062490	89.5425	75.817
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.7089	73.4177	haplochromis_burtoni	ENSHBUP00000030333	89.5425	75.817
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.7089	73.4177	astatotilapia_calliptera	ENSACLP00000010295	89.5425	75.817
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	78.481	63.2911	sparus_aurata	ENSSAUP00010066780	76.0736	61.3497
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	85.443	70.2532	lates_calcarifer	ENSLCAP00010015866	88.8158	73.0263
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	84.1772	68.3544	dicentrarchus_labrax	ENSDLAP00005066449	87.5	71.0526
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	50.6329	37.9747	cyprinodon_variegatus	ENSCVAP00000031913	79.2079	59.4059
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	50.6329	37.9747	cyprinodon_variegatus	ENSCVAP00000018220	79.2079	59.4059
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	79.1139	63.924	takifugu_rubripes	ENSTRUP00000088024	80.6452	65.1613
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.076	72.1519	oryzias_melastigma	ENSOMEP00000015292	87.7419	73.5484
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.7089	73.4177	neolamprologus_brichardi	ENSNBRP00000012684	89.5425	75.817
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.7089	75.9494	kryptolebias_marmoratus	ENSKMAP00000008059	89.5425	78.4314
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	85.443	69.6203	poecilia_formosa	ENSPFOP00000011141	86.5385	70.5128
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	79.1139	66.4557	poecilia_latipinna	ENSPLAP00000006107	83.8926	70.4698
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	80.3797	64.557	scophthalmus_maximus	ENSSMAP00000026689	82.4675	66.2338
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	81.0127	65.8228	cottoperca_gobio	ENSCGOP00000029100	63.6816	51.7413
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	40.5063	34.1772	cottoperca_gobio	ENSCGOP00000055232	75.2941	63.5294
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	78.481	62.0253	labrus_bergylta	ENSLBEP00000027664	80.5195	63.6364
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	63.924	56.962	amphilophus_citrinellus	ENSACIP00000007734	92.6606	82.5688
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	85.443	71.519	gasterosteus_aculeatus	ENSGACP00000014561	88.8158	74.3421
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	84.8101	70.2532	acanthochromis_polyacanthus	ENSAPOP00000007646	87.5817	72.549
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.7089	71.519	anabas_testudineus	ENSATEP00000054103	89.5425	73.8562
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	75.9494	60.7595	tetraodon_nigroviridis	ENSTNIP00000009440	79.4702	63.5762
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.076	70.2532	amphiprion_ocellaris	ENSAOCP00000015267	88.8889	72.549
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	87.3418	73.4177	nothobranchius_furzeri	ENSNFUP00015053852	90.1961	75.817
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	83.5443	68.3544	oryzias_javanicus	ENSOJAP00000029580	75.8621	62.069
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	82.9114	69.6203	hippocampus_comes	ENSHCOP00000011238	85.6209	71.8954
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.076	69.6203	stegastes_partitus	ENSSPAP00000002384	88.8889	71.8954
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.7089	73.4177	maylandia_zebra	ENSMZEP00005018749	89.5425	75.817
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.7089	71.519	mastacembelus_armatus	ENSMAMP00000036607	89.5425	73.8562
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	87.3418	72.7848	betta_splendens	ENSBSLP00000048314	90.1961	75.1634
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.076	70.2532	amphiprion_percula	ENSAPEP00000016170	72.7273	59.3583
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	84.1772	70.8861	oryzias_sinensis	ENSOSIP00000018603	86.9281	73.2026
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	75.3165	54.4304	saccharomyces_cerevisiae	YEL034W	75.7962	54.7771
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	75.3165	56.3291	saccharomyces_cerevisiae	YJR047C	75.7962	56.6879
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	53.7975	41.7722	cynoglossus_semilaevis	ENSCSEP00000005061	75.8929	58.9286
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	86.7089	73.4177	pundamilia_nyererei	ENSPNYP00000007810	89.5425	75.817
ENSMMDG00005004696	myripristis_murdjan	ENSMMDP00005008481	83.5443	70.2532	sander_lucioperca	ENSSLUP00000042737	86.8421	73.0263

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression