RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMLUG00000026107	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	496 bases	Strand	Plus strand
Position	GL429771 : 15113889 - 15114384	RNA binding domain	Ribosomal_S27
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMLUP00000021840	Ribosomal_S27	PF01599	4.9e-23	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMLUT00000029599	496	155aa	ENSMLUP00000021840

Gene Model

Click here to download ENSMLUG00000026107's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMLUG00000026107's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000018010	88.4615	86.5385	myotis_lucifugus	ENSMLUP00000021840	89.0323	87.0968
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000015558	90.3846	88.4615	myotis_lucifugus	ENSMLUP00000021840	90.9677	89.0323
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021264	89.6774	86.4516	myotis_lucifugus	ENSMLUP00000021840	89.6774	86.4516
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000018078	30.9942	18.1287	myotis_lucifugus	ENSMLUP00000021840	34.1936	20
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000000494	11.8621	8.13793	myotis_lucifugus	ENSMLUP00000021840	55.4839	38.0645
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000020606	29.6512	17.4419	myotis_lucifugus	ENSMLUP00000021840	32.9032	19.3548
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021652	44.4444	43.2099	myotis_lucifugus	ENSMLUP00000021840	46.4516	45.1613
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000019269	8.77193	4.38596	myotis_lucifugus	ENSMLUP00000021840	6.45161	3.22581
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000005858	10.9562	5.77689	myotis_lucifugus	ENSMLUP00000021840	35.4839	18.7097
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000020992	27.541	24.918	myotis_lucifugus	ENSMLUP00000021840	54.1936	49.0323
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000020170	78.0488	48.7805	myotis_lucifugus	ENSMLUP00000021840	20.6452	12.9032
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021979	60.9375	53.9062	myotis_lucifugus	ENSMLUP00000021840	50.3226	44.5161
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000019797	70.3125	61.7188	myotis_lucifugus	ENSMLUP00000021840	58.0645	50.9677
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000016471	58.5366	49.5935	myotis_lucifugus	ENSMLUP00000021840	46.4516	39.3548
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000018745	69.2913	62.2047	myotis_lucifugus	ENSMLUP00000021840	56.7742	50.9677
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000022745	60.6838	50.4273	myotis_lucifugus	ENSMLUP00000021840	45.8064	38.0645

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	85.1613	80	dasypus_novemcinctus	ENSDNOP00000029539	81.9876	77.0186
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	89.0323	84.5161	dasypus_novemcinctus	ENSDNOP00000022298	87.8981	83.4395
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	90.9677	89.0323	callithrix_jacchus	ENSCJAP00000080437	90.3846	88.4615
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	90.9677	89.0323	callithrix_jacchus	ENSCJAP00000084981	90.3846	88.4615
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	91.6129	89.6774	callithrix_jacchus	ENSCJAP00000091298	91.6129	89.6774
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	62.5806	54.8387	macaca_mulatta	ENSMMUP00000067421	71.8519	62.963
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	67.7419	61.9355	macaca_nemestrina	ENSMNEP00000035304	78.3582	71.6418
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	78.0645	76.129	gorilla_gorilla	ENSGGOP00000038520	64.7059	63.1016
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	78.0645	72.9032	pan_paniscus	ENSPPAP00000019542	88.9706	83.0882
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	90.9677	89.0323	pongo_abelii	ENSPPYP00000007706	90.9677	89.0323
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	78.7097	73.5484	pan_troglodytes	ENSPTRP00000080278	89.7059	83.8235
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	72.9032	63.2258	felis_catus	ENSFCAP00000032729	64.2045	55.6818
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	72.9032	62.5806	panthera_pardus	ENSPPRP00000021024	64.5714	55.4286
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	80.6452	77.4194	balaenoptera_musculus	ENSBMSP00010028470	66.4894	63.8298
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	75.4839	69.6774	loxodonta_africana	ENSLAFP00000024436	68.0233	62.7907
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	69.6774	61.9355	capra_hircus	ENSCHIP00000021132	85.0394	75.5906
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	88.3871	83.871	marmota_marmota_marmota	ENSMMMP00000006533	84.0491	79.7546
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	80.6452	76.129	cricetulus_griseus_chok1gshd	ENSCGRP00001011110	87.4126	82.5175
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	89.6774	87.0968	octodon_degus	ENSODEP00000026236	89.1026	86.5385
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	89.6774	85.8064	monodelphis_domestica	ENSMODP00000022067	89.1026	85.2564
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	80.6452	76.129	bos_grunniens	ENSBGRP00000006721	86.8056	81.9444
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	85.1613	83.2258	microcebus_murinus	ENSMICP00000027681	86.8421	84.8684
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	79.3548	74.8387	bos_indicus_hybrid	ENSBIXP00005013396	85.4167	80.5556
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	67.7419	63.2258	chinchilla_lanigera	ENSCLAP00000005260	60	56
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	89.6774	87.7419	otolemur_garnettii	ENSOGAP00000020687	89.6774	87.7419
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	90.3226	88.3871	saimiri_boliviensis_boliviensis	ENSSBOP00000006203	89.7436	87.8205
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	87.0968	84.5161	phascolarctos_cinereus	ENSPCIP00000040403	86.5385	83.9744
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	80	75.4839	bison_bison_bison	ENSBBBP00000012888	86.1111	81.25
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	89.6774	87.7419	rhinolophus_ferrumequinum	ENSRFEP00010003552	89.1026	87.1795
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	78.7097	75.4839	nomascus_leucogenys	ENSNLEP00000039422	89.7059	86.0294
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	90.3226	88.3871	rhinopithecus_bieti	ENSRBIP00000000621	89.7436	87.8205
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	89.6774	87.0968	cebus_imitator	ENSCCAP00000027910	89.1026	86.5385
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	79.3548	71.6129	moschus_moschiferus	ENSMMSP00000000401	79.8701	72.0779
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	81.9355	74.8387	ictidomys_tridecemlineatus	ENSSTOP00000019666	81.4103	74.359
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	90.9677	87.0968	prolemur_simus	ENSPSMP00000023412	90.3846	86.5385
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	81.2903	79.3548	jaculus_jaculus	ENSJJAP00000011131	88.1119	86.014
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	79.3548	76.7742	nannospalax_galili	ENSNGAP00000012583	86.6197	83.8028
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	12.9032	6.45161	ciona_intestinalis	ENSCINP00000027318	15.873	7.93651
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	37.4194	21.2903	ciona_intestinalis	ENSCINP00000030891	24.5763	13.9831
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	34.1936	25.1613	callorhinchus_milii	ENSCMIP00000039971	34.1936	25.1613
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	34.8387	25.1613	salmo_salar	ENSSSAP00000144109	34.6154	25
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	34.8387	25.1613	salmo_salar	ENSSSAP00000131651	34.6154	25
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	34.8387	25.1613	salmo_salar	ENSSSAP00000104424	34.6154	25
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	34.8387	25.1613	salmo_salar	ENSSSAP00000133567	34.6154	25
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	34.8387	25.1613	salmo_trutta	ENSSTUP00000115509	34.6154	25
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	67.0968	54.1936	astatotilapia_calliptera	ENSACLP00000004031	49.0566	39.6226
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	34.1936	18.0645	sparus_aurata	ENSSAUP00010048113	27.8947	14.7368
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	90.9677	89.0323	xenopus_tropicalis	ENSXETP00000009809	90.3846	88.4615
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	34.1936	23.2258	dicentrarchus_labrax	ENSDLAP00005074568	33.5443	22.7848
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	43.871	36.7742	geospiza_fortis	ENSGFOP00000004915	62.963	52.7778
ENSMLUG00000026107	myotis_lucifugus	ENSMLUP00000021840	30.9677	18.7097	cynoglossus_semilaevis	ENSCSEP00000012121	29.6296	17.9012

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression