RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMICG00000026414	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	6733 bases	Strand	Plus strand
Position	25 : 23714721 - 23721453	RNA binding domain	Ribosomal_L22
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMICP00000017886	Ribosomal_L22	PF00237	2.9e-43	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMICT00000036644	741	187aa	ENSMICP00000017886

Gene Model

Click here to download ENSMICG00000026414's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMICG00000026414's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMICG00000026414	microcebus_murinus	ENSMICP00000024567	91.6667	88.6905	microcebus_murinus	ENSMICP00000017886	82.3529	79.6791
ENSMICG00000026414	microcebus_murinus	ENSMICP00000026326	90.1734	86.7052	microcebus_murinus	ENSMICP00000017886	83.4225	80.2139
ENSMICG00000026414	microcebus_murinus	ENSMICP00000018506	94.5652	91.8478	microcebus_murinus	ENSMICP00000017886	93.0481	90.3743
ENSMICG00000026414	microcebus_murinus	ENSMICP00000050642	95.1087	92.9348	microcebus_murinus	ENSMICP00000017886	93.5829	91.4438
ENSMICG00000026414	microcebus_murinus	ENSMICP00000050664	94.5652	92.3913	microcebus_murinus	ENSMICP00000017886	93.0481	90.9091
ENSMICG00000026414	microcebus_murinus	ENSMICP00000021134	92.1053	90	microcebus_murinus	ENSMICP00000017886	93.5829	91.4438
ENSMICG00000026414	microcebus_murinus	ENSMICP00000033114	91.0615	87.7095	microcebus_murinus	ENSMICP00000017886	87.1658	83.9572

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	92.5134	89.8396	sarcophilus_harrisii	ENSSHAP00000043230	93.5135	90.8108
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	60.4278	58.8235	notamacropus_eugenii	ENSMEUP00000015268	95.7627	93.2203
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	62.5668	58.8235	choloepus_hoffmanni	ENSCHOP00000006965	89.313	83.9695
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	61.4973	56.1497	echinops_telfairi	ENSETEP00000005471	77.1812	70.4698
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	91.4438	89.3048	macaca_mulatta	ENSMMUP00000024788	75	73.2456
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	90.9091	89.3048	canis_lupus_familiaris	ENSCAFP00845022904	87.1795	85.641
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	90.9091	89.3048	vulpes_vulpes	ENSVVUP00000019390	87.1795	85.641
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	52.4064	49.7326	tursiops_truncatus	ENSTTRP00000005460	74.8092	70.9924
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	90.9091	89.3048	delphinapterus_leucas	ENSDLEP00000006127	83.3333	81.8627
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	60.4278	57.754	procavia_capensis	ENSPCAP00000002899	95.7627	91.5254
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	91.4438	89.3048	sus_scrofa	ENSSSCP00000050735	91.9355	89.7849
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	70.5882	67.3797	bos_taurus	ENSBTAP00000069726	62.2642	59.434
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	88.2353	87.1658	capra_hircus	ENSCHIP00000008522	90.1639	89.071
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	89.8396	87.7005	ovis_aries_rambouillet	ENSOARP00020013522	88.4211	86.3158
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	94.1176	90.9091	oryctolagus_cuniculus	ENSOCUP00000029943	75.8621	73.2759
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	83.9572	82.3529	cricetulus_griseus_chok1gshd	ENSCGRP00001007392	95.1515	93.3333
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	90.3743	86.0963	rattus_norvegicus	ENSRNOP00000081180	80.8612	77.0335
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	72.1925	67.9144	rattus_norvegicus	ENSRNOP00000034767	61.3636	57.7273
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	82.8877	80.7487	octodon_degus	ENSODEP00000009801	93.3735	90.9639
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	68.984	65.7754	bos_indicus_hybrid	ENSBIXP00005025744	58.6364	55.9091
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	85.0267	80.7487	bos_grunniens	ENSBGRP00000006210	80.303	76.2626
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	71.6578	67.9144	bos_grunniens	ENSBGRP00000028783	66.0098	62.5616
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	85.0267	82.8877	bison_bison_bison	ENSBBBP00000004292	85.9459	83.7838
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	86.0963	82.8877	otolemur_garnettii	ENSOGAP00000020976	87.5	84.2391
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	63.1016	59.893	pteropus_vampyrus	ENSPVAP00000001859	90.0763	85.4962
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	90.9091	90.3743	cervus_hanglu_yarkandensis	ENSCHYP00000040352	84.5771	84.0796
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	77.5401	71.6578	phocoena_sinus	ENSPSNP00000015403	75.5208	69.7917
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	42.246	41.1765	sorex_araneus	ENSSARP00000001020	66.9492	65.2542
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	87.7005	87.1658	moschus_moschiferus	ENSMMSP00000025013	94.2529	93.6782
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	83.9572	80.2139	rhinopithecus_roxellana	ENSRROP00000015290	90.7514	86.7052
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	90.9091	89.3048	canis_lupus_dingo	ENSCAFP00020034105	87.1795	85.641
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	89.8396	89.3048	monodon_monoceros	ENSMMNP00015001112	93.8548	93.2961
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	74.8663	62.5668	caenorhabditis_elegans	Y48G8AL.8.1	74.8663	62.5668
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	79.1444	64.1711	drosophila_melanogaster	FBpp0070942	79.5699	64.5161
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	85.0267	75.9358	ciona_intestinalis	ENSCINP00000022040	86.8852	77.5956
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	86.631	80.2139	eptatretus_burgeri	ENSEBUP00000015038	88.0435	81.5217
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	51.3369	50.2674	petromyzon_marinus	ENSPMAP00000006771	91.4286	89.5238
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	78.0749	73.262	callorhinchus_milii	ENSCMIP00000032634	66.9725	62.844
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	92.5134	88.2353	xenopus_tropicalis	ENSXETP00000043811	94.0217	89.6739
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	85.0267	82.3529	sphenodon_punctatus	ENSSPUP00000022472	94.6429	91.6667
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	62.0321	54.5455	laticauda_laticaudata	ENSLLTP00000022282	64.8045	56.9832
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	49.1979	44.385	notechis_scutatus	ENSNSUP00000006945	84.4037	76.1468
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	59.3583	54.5455	pseudonaja_textilis	ENSPTXP00000006481	76.5517	70.3448
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	93.5829	91.4438	gallus_gallus	ENSGALP00010015253	95.1087	92.9348
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	90.3743	89.8396	meleagris_gallopavo	ENSMGAP00000028350	87.5648	87.0466
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	91.4438	89.8396	parus_major	ENSPMJP00000003062	88.1443	86.5979
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	38.5027	35.2941	anolis_carolinensis	ENSACAP00000017723	85.7143	78.5714
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	58.2888	54.5455	oryzias_sinensis	ENSOSIP00000007303	61.236	57.3034
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	65.7754	50.8021	saccharomyces_cerevisiae	YKL180W	66.8478	51.6304
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	65.2406	50.8021	saccharomyces_cerevisiae	YJL177W	66.3043	51.6304
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	90.9091	87.1658	leptobrachium_leishanense	ENSLLEP00000006960	79.8122	76.5258
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	91.9786	90.3743	taeniopygia_guttata	ENSTGUP00000023482	83.0918	81.6425
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	91.9786	90.3743	taeniopygia_guttata	ENSTGUP00000036227	83.0918	81.6425
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	83.9572	74.3316	ciona_savignyi	ENSCSAVP00000017488	83.5106	73.9362
ENSMICG00000026414	microcebus_murinus	ENSMICP00000017886	79.6791	74.3316	pygocentrus_nattereri	ENSPNAP00000024605	65.0655	60.6987

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression