RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMICG00000017102	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3764 bases	Strand	Minus strand
Position	19 : 12787955 - 12791718	RNA binding domain	Ribosomal_L22
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMICP00000021134	Ribosomal_L22	PF00237	3.4e-44	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMICT00000042861	688	190aa	ENSMICP00000021134

Gene Model

Click here to download ENSMICG00000017102's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMICG00000017102's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMICG00000017102	microcebus_murinus	ENSMICP00000050664	99.4565	99.4565	microcebus_murinus	ENSMICP00000021134	96.3158	96.3158
ENSMICG00000017102	microcebus_murinus	ENSMICP00000050642	100	100	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421
ENSMICG00000017102	microcebus_murinus	ENSMICP00000018506	99.4565	98.913	microcebus_murinus	ENSMICP00000021134	96.3158	95.7895
ENSMICG00000017102	microcebus_murinus	ENSMICP00000024567	96.4286	95.2381	microcebus_murinus	ENSMICP00000021134	85.2632	84.2105
ENSMICG00000017102	microcebus_murinus	ENSMICP00000026326	93.6416	93.0636	microcebus_murinus	ENSMICP00000021134	85.2632	84.7368
ENSMICG00000017102	microcebus_murinus	ENSMICP00000017886	93.5829	91.4438	microcebus_murinus	ENSMICP00000021134	92.1053	90
ENSMICG00000017102	microcebus_murinus	ENSMICP00000033114	96.0894	94.4134	microcebus_murinus	ENSMICP00000021134	90.5263	88.9474

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	59.4737	58.4211	notamacropus_eugenii	ENSMEUP00000015268	95.7627	94.0678
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	61.5789	58.4211	choloepus_hoffmanni	ENSCHOP00000006965	89.313	84.7328
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	51.5789	49.4737	tursiops_truncatus	ENSTTRP00000005460	74.8092	71.7557
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	physeter_catodon	ENSPCTP00005014442	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	equus_asinus	ENSEASP00005056441	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	59.4737	57.3684	procavia_capensis	ENSPCAP00000002899	95.7627	92.3729
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	ovis_aries_rambouillet	ENSOARP00020022923	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.3158	96.3158	oryctolagus_cuniculus	ENSOCUP00000019762	97.861	97.861
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	oryctolagus_cuniculus	ENSOCUP00000000071	98.3957	98.3957
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	marmota_marmota_marmota	ENSMMMP00000006856	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	cricetulus_griseus_chok1gshd	ENSCGRP00001021230	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	95.7895	95.7895	mesocricetus_auratus	ENSMAUP00000002505	98.913	98.913
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	mesocricetus_auratus	ENSMAUP00000016914	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	mus_musculus	ENSMUSP00000157556	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	mus_spicilegus	ENSMSIP00000022704	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	mus_caroli	MGP_CAROLIEiJ_P0047139	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	mus_pahari	MGP_PahariEiJ_P0039707	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	cavia_porcellus	ENSCPOP00000018066	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	octodon_degus	ENSODEP00000026588	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	95.7895	95.7895	octodon_degus	ENSODEP00000026059	98.913	98.913
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	octodon_degus	ENSODEP00000025652	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	bos_grunniens	ENSBGRP00000036714	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	bison_bison_bison	ENSBBBP00000015082	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	chinchilla_lanigera	ENSCLAP00000012912	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	myotis_lucifugus	ENSMLUP00000018895	98.3957	98.3957
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	62.1053	59.4737	pteropus_vampyrus	ENSPVAP00000001859	90.0763	86.2595
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	sciurus_vulgaris	ENSSVLP00005025744	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	ictidomys_tridecemlineatus	ENSSTOP00000004654	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	41.5789	40.5263	sorex_araneus	ENSSARP00000001020	66.9492	65.2542
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	microtus_ochrogaster	ENSMOCP00000012729	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	75.7895	63.6842	caenorhabditis_elegans	Y48G8AL.8.1	77.0053	64.7059
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	81.5789	66.8421	drosophila_melanogaster	FBpp0070942	83.3333	68.2796
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	87.8947	78.4211	ciona_intestinalis	ENSCINP00000022040	91.2568	81.4208
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	90	84.7368	eptatretus_burgeri	ENSEBUP00000015038	92.9348	87.5
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	50.5263	49.4737	petromyzon_marinus	ENSPMAP00000006771	91.4286	89.5238
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	78.9474	74.2105	callorhinchus_milii	ENSCMIP00000032634	68.8073	64.6789
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	95.7895	93.6842	xenopus_tropicalis	ENSXETP00000043811	98.913	96.7391
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	chrysemys_picta_bellii	ENSCPBP00000036954	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	crocodylus_porosus	ENSCPRP00005021007	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	88.4211	87.3684	sphenodon_punctatus	ENSSPUP00000022472	100	98.8095
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	laticauda_laticaudata	ENSLLTP00000005442	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	gallus_gallus	ENSGALP00010017084	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	serinus_canaria	ENSSCAP00000022599	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	pelodiscus_sinensis	ENSPSIP00000005939	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	57.3684	53.6842	oryzias_sinensis	ENSOSIP00000007303	61.236	57.3034
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	67.3684	52.1053	saccharomyces_cerevisiae	YKL180W	69.5652	53.8043
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	66.8421	52.1053	saccharomyces_cerevisiae	YJL177W	69.0217	53.8043
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	90.5263	87.8947	leptobrachium_leishanense	ENSLLEP00000006960	80.7512	78.4038
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	86.8421	76.8421	ciona_savignyi	ENSCSAVP00000017488	87.766	77.6596
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	geospiza_fortis	ENSGFOP00000019430	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	anser_brachyrhynchus	ENSABRP00000021685	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	struthio_camelus_australis	ENSSCUP00000002068	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	strigops_habroptila	ENSSHBP00005012655	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	79.4737	74.7368	pygocentrus_nattereri	ENSPNAP00000024605	65.9389	62.0087
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	podarcis_muralis	ENSPMRP00000014359	100	100
ENSMICG00000017102	microcebus_murinus	ENSMICP00000021134	96.8421	96.8421	naja_naja	ENSNNAP00000021501	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression