RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMICG00000008022	Gene ID		Accession	-
Symbol	MBD4	Alias	-	Full Name	methyl-CpG binding domain 4, DNA glycosylase
Status	Confidence	Length	10667 bases	Strand	Minus strand
Position	23 : 15947713 - 15958379	RNA binding domain	MBD
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMICP00000023317	MBD	PF01429	1.6e-20	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
MBD4-201	ENSMICT00000031925	3104	575aa	ENSMICP00000023317
MBD4-202	ENSMICT00000008023	789	262aa	ENSMICP00000007308

Gene Model

Click here to download ENSMICG00000008022's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMICG00000008022's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMICG00000008022	microcebus_murinus	ENSMICP00000004687	34.9301	20.5589	microcebus_murinus	ENSMICP00000023317	30.4348	17.913

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	64.5217	50.9565	ornithorhynchus_anatinus	ENSOANP00000007275	68.0734	53.7615
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	64.3478	53.3913	sarcophilus_harrisii	ENSSHAP00000015187	70.2087	58.2543
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	33.913	27.4783	notamacropus_eugenii	ENSMEUP00000014242	52.9891	42.9348
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	64	57.5652	choloepus_hoffmanni	ENSCHOP00000002990	63.8889	57.4653
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	80.5217	72.3478	dasypus_novemcinctus	ENSDNOP00000032553	80.1038	71.9723
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	69.2174	59.3043	erinaceus_europaeus	ENSEEUP00000010444	73.8404	63.2653
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	85.913	79.1304	callithrix_jacchus	ENSCJAP00000031837	86.5149	79.6848
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	87.4783	81.0435	cercocebus_atys	ENSCATP00000023300	87.9371	81.4685
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	86.4348	80	macaca_mulatta	ENSMMUP00000016705	86.8881	80.4196
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	83.3043	76.6957	macaca_nemestrina	ENSMNEP00000010731	85.6887	78.8909
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	81.5652	73.5652	papio_anubis	ENSPANP00000059002	70	63.1343
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	87.1304	80.5217	mandrillus_leucophaeus	ENSMLEP00000005744	87.5874	80.9441
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	89.0435	81.7391	gorilla_gorilla	ENSGGOP00000024137	88.2759	81.0345
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	88.5217	81.5652	pan_paniscus	ENSPPAP00000026900	88.676	81.7073
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	88.6957	81.7391	pongo_abelii	ENSPPYP00000015005	89.0052	82.0244
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	88.5217	81.913	homo_sapiens	ENSP00000394080	88.676	82.0557
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	86.2609	77.2174	canis_lupus_familiaris	ENSCAFP00845039165	86.8652	77.7583
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	89.2174	82.2609	pan_troglodytes	ENSPTRP00000026489	88.4483	81.5517
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	86.4348	77.2174	vulpes_vulpes	ENSVVUP00000019261	87.193	77.8947
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	75.3043	68.3478	ursus_americanus	ENSUAMP00000000824	88.1874	80.0407
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	84.3478	75.3043	mustela_putorius_furo	ENSMPUP00000017087	85.8407	76.6372
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	86.4348	78.087	ailuropoda_melanoleuca	ENSAMEP00000004805	87.3462	78.9104
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	85.5652	78.7826	panthera_leo	ENSPLOP00000002878	86.1646	79.3345
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	84.6957	78.087	panthera_pardus	ENSPPRP00000025977	86.3475	79.6099
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	85.2174	78.9565	felis_catus	ENSFCAP00000000077	85.8144	79.5096
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	84	75.3043	tursiops_truncatus	ENSTTRP00000010681	86.7145	77.7379
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	85.913	76.5217	delphinapterus_leucas	ENSDLEP00000011354	86.5149	77.0578
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	87.3043	77.5652	physeter_catodon	ENSPCTP00005008391	87.1528	77.4306
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	18.7826	18.087	balaenoptera_musculus	ENSBMSP00010014404	100	96.2963
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	83.6522	76	loxodonta_africana	ENSLAFP00000008883	84.5343	76.8014
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	83.6522	76.5217	equus_asinus	ENSEASP00005021643	75.1562	68.75
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	82.4348	75.6522	equus_caballus	ENSECAP00000066748	76.699	70.3884
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	75.4783	66.6087	procavia_capensis	ENSPCAP00000012049	78.9091	69.6364
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	84.8696	75.1304	sus_scrofa	ENSSSCP00000052533	86.067	76.1905
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	81.913	73.7391	camelus_dromedarius	ENSCDRP00005026444	79.966	71.9864
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	80.3478	71.1304	bos_taurus	ENSBTAP00000028844	83.3935	73.8267
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	80.1739	70.087	capra_hircus	ENSCHIP00000005716	83.213	72.7437
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	73.913	64.1739	ovis_aries_rambouillet	ENSOARP00020033542	83.8264	72.7811
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	74.6087	64.3478	ochotona_princeps	ENSOPRP00000000437	75.6614	65.2557
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	78.7826	70.9565	oryctolagus_cuniculus	ENSOCUP00000043468	71.2264	64.1509
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	84	75.1304	marmota_marmota_marmota	ENSMMMP00000012341	85.1852	76.1905
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	59.4783	52.5217	dipodomys_ordii	ENSDORP00000000847	74.8359	66.0832
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	49.5652	42.9565	urocitellus_parryii	ENSUPAP00010029273	76.4075	66.2198
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	18.7826	18.2609	urocitellus_parryii	ENSUPAP00010029266	100	97.2222
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	77.0435	67.6522	cricetulus_griseus_chok1gshd	ENSCGRP00001003011	79.1071	69.4643
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	28.8696	27.6522	mesocricetus_auratus	ENSMAUP00000014504	94.8571	90.8571
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	74.2609	65.5652	mus_musculus	ENSMUSP00000032469	77.0758	68.0505
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	74.2609	65.2174	mus_spicilegus	ENSMSIP00000000791	77.0758	67.6895
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	75.8261	66.2609	mus_caroli	MGP_CAROLIEiJ_P0075599	77.305	67.5532
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	73.913	64.6957	mus_spretus	MGP_SPRETEiJ_P0078670	76.8535	67.2694
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	76.3478	67.6522	rattus_norvegicus	ENSRNOP00000092006	74.4068	65.9322
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	46.4348	37.3913	mus_pahari	MGP_PahariEiJ_P0051798	66.9173	53.8847
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	29.3913	27.3043	cavia_porcellus	ENSCPOP00000004474	96.0227	89.2045
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	18.4348	17.7391	octodon_degus	ENSODEP00000003792	98.1481	94.4444
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	18.7826	17.913	monodelphis_domestica	ENSMODP00000033621	100	95.3704
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	35.3043	24.5217	monodelphis_domestica	ENSMODP00000057510	54.5699	37.9032
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	81.7391	72.5217	heterocephalus_glaber_female	ENSHGLP00000055331	82.8924	73.545
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	85.5652	77.2174	ursus_maritimus	ENSUMAP00000024092	87.234	78.7234
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	18.6087	17.5652	vombatus_ursinus	ENSVURP00010018693	99.0741	93.5185
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	50.2609	46.2609	vicugna_pacos	ENSVPAP00000003753	52.3551	48.1884
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	78.6087	68.5217	bos_indicus_hybrid	ENSBIXP00005042416	71.406	62.2433
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	80.6957	71.3043	bos_grunniens	ENSBGRP00000038030	83.7545	74.0072
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	34.6087	25.0435	phascolarctos_cinereus	ENSPCIP00000002772	53.2086	38.5027
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	18.6087	17.7391	phascolarctos_cinereus	ENSPCIP00000002767	99.0741	94.4444
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	80.8696	71.6522	bison_bison_bison	ENSBBBP00000002581	83.1843	73.703
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	18.7826	18.2609	panthera_tigris_altaica	ENSPTIP00000011757	100	97.2222
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	83.3043	78.087	otolemur_garnettii	ENSOGAP00000009158	87.5686	82.0841
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	77.3913	70.9565	aotus_nancymaae	ENSANAP00000000696	83.9623	76.9811
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	78.2609	69.913	chinchilla_lanigera	ENSCLAP00000013004	79.646	71.1504
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	83.3043	75.8261	myotis_lucifugus	ENSMLUP00000013439	88.3764	80.4428
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	88	79.3043	pteropus_vampyrus	ENSPVAP00000004957	87.8472	79.1667
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	82.2609	73.2174	sciurus_vulgaris	ENSSVLP00005024490	82.6923	73.6014
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	84.8696	77.5652	rhinolophus_ferrumequinum	ENSRFEP00010027106	86.067	78.6596
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	80.5217	69.913	cervus_hanglu_yarkandensis	ENSCHYP00000022163	84.029	72.9583
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	75.4783	65.3913	peromyscus_maniculatus_bairdii	ENSPEMP00000004117	77.5	67.1429
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	88.8696	82.2609	nomascus_leucogenys	ENSNLEP00000006477	88.4083	81.8339
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	80.3478	70.9565	bos_mutus	ENSBMUP00000014066	83.5443	73.7794
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	88.1739	80.8696	cebus_imitator	ENSCCAP00000024023	87.5648	80.3109
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	24.8696	23.3043	nannospalax_galili	ENSNGAP00000016733	94.702	88.7417
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	18.7826	18.2609	catagonus_wagneri	ENSCWAP00000023914	100	97.2222
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	48.3478	40.6957	catagonus_wagneri	ENSCWAP00000023937	75.9563	63.9344
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	18.7826	18.2609	carlito_syrichta	ENSTSYP00000010225	100	97.2222
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	86.7826	77.913	phocoena_sinus	ENSPSNP00000031559	86.4818	77.643
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	82.7826	74.087	ictidomys_tridecemlineatus	ENSSTOP00000016633	84.8485	75.9358
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	87.1304	80.3478	chlorocebus_sabaeus	ENSCSAP00000005288	87.5874	80.7692
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	59.8261	50.6087	sorex_araneus	ENSSARP00000004075	59.8261	50.6087
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	80.8696	70.9565	moschus_moschiferus	ENSMMSP00000032645	83.1843	72.9875
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	62.4348	51.6522	tupaia_belangeri	ENSTBEP00000002621	62.6527	51.8325
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	95.1304	90.7826	prolemur_simus	ENSPSMP00000001354	94.8007	90.4679
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	87.3043	81.2174	rhinopithecus_bieti	ENSRBIP00000007645	87.7622	81.6434
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	87.1304	79.6522	saimiri_boliviensis_boliviensis	ENSSBOP00000003504	87.4346	79.9302
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	87.3043	81.0435	rhinopithecus_roxellana	ENSRROP00000009387	87.7622	81.4685
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	41.7391	33.5652	microtus_ochrogaster	ENSMOCP00000003094	65.7534	52.8767
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	29.5652	28	jaculus_jaculus	ENSJJAP00000014164	96.5909	91.4773
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	86.2609	77.2174	canis_lupus_dingo	ENSCAFP00020008741	87.0175	77.8947
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	84.6957	75.4783	neovison_vison	ENSNVIP00000011580	85.8907	76.5432
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	86.2609	76.6957	monodon_monoceros	ENSMMNP00015016486	86.1111	76.5625
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	18.6087	18.4348	propithecus_coquereli	ENSPCOP00000013866	99.0741	98.1481
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	50.9565	37.7391	xenopus_tropicalis	ENSXETP00000056046	62.0763	45.9746
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	61.3913	46.087	chrysemys_picta_bellii	ENSCPBP00000020441	61.8214	46.4098
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	57.3913	43.3043	crocodylus_porosus	ENSCPRP00005018070	58.0986	43.838
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	57.3913	43.8261	sphenodon_punctatus	ENSSPUP00000022584	59.5668	45.4874
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	42.087	30.6087	laticauda_laticaudata	ENSLLTP00000014277	56.4103	41.0256
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	17.7391	15.1304	notechis_scutatus	ENSNSUP00000008064	93.578	79.8165
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	42.6087	31.4783	pseudonaja_textilis	ENSPTXP00000003962	56.9767	42.093
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	17.0435	14.9565	anas_platyrhynchos_platyrhynchos	ENSAPLP00000003724	90.7407	79.6296
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	41.2174	32	gallus_gallus	ENSGALP00010027549	54.1096	42.0091
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	32.1739	28	meleagris_gallopavo	ENSMGAP00000010634	37.7551	32.8571
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	43.6522	33.7391	serinus_canaria	ENSSCAP00000022142	64.5244	49.8715
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	37.913	29.3913	parus_major	ENSPMJP00000007261	62.8242	48.7032
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	60.5217	46.7826	pelodiscus_sinensis	ENSPSIP00000008657	59.2845	45.8262
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	50.4348	39.8261	anolis_carolinensis	ENSACAP00000014468	55.4493	43.7859
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	37.7391	28.5217	ficedula_albicollis	ENSFALP00000014264	63.6364	48.0938
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	44.6957	33.2174	aquila_chrysaetos_chrysaetos	ENSACCP00020015533	61.4833	45.6938
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	56	41.0435	salvator_merianae	ENSSMRP00000003608	60.7547	44.5283
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	50.7826	37.7391	taeniopygia_guttata	ENSTGUP00000010808	50.9599	37.8709
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	61.3913	46.6087	terrapene_carolina_triunguis	ENSTMTP00000026974	61.8214	46.9352
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	60.6957	46.6087	chelonoidis_abingdonii	ENSCABP00000001850	59.9656	46.0481
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	37.5652	30.6087	coturnix_japonica	ENSCJPP00005026740	58.5366	47.6965
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	22.087	17.2174	ciona_savignyi	ENSCSAVP00000001836	70.9497	55.3073
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	17.2174	14.7826	geospiza_fortis	ENSGFOP00000013991	91.6667	78.7037
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	17.0435	14.9565	anser_brachyrhynchus	ENSABRP00000009052	90.7407	79.6296
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	52.6957	39.1304	struthio_camelus_australis	ENSSCUP00000017671	62.6033	46.4876
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	61.0435	46.9565	gopherus_evgoodei	ENSGEVP00005010446	61.4711	47.2855
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	51.3043	39.3043	strigops_habroptila	ENSSHBP00005022609	59.3561	45.4728
ENSMICG00000008022	microcebus_murinus	ENSMICP00000023317	53.5652	40	podarcis_muralis	ENSPMRP00000007491	56	41.8182

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression