RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSMGAG00000022096	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	546 bases	Strand	Plus strand
Position	2 : 104309735 - 104310280	RNA binding domain	PTH2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMGAP00000024745	PTH2	PF01981	5.8e-10	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMGAT00000023403	360	119aa	ENSMGAP00000024745

Gene Model

Click here to download ENSMGAG00000022096's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMGAG00000022096's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMGAG00000022096

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMGAG00000022096	meleagris_gallopavo	ENSMGAP00000024745	56.3025	40.3361	cynoglossus_semilaevis	ENSCSEP00000004697	55.8333	40

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression