RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMGAG00000021654	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	18099 bases	Strand	Minus strand
Position	1 : 189696034 - 189714132	RNA binding domain	KH_2 , Ribosomal_S3_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMGAP00000020209	KH_2	PF07650	2e-11	1
ENSMGAP00000020209	Ribosomal_S3_C	PF00189	1.3e-23	2
ENSMGAP00000024955	KH_2	PF07650	2.3e-11	1
ENSMGAP00000027896	KH_2	PF07650	2.6e-11	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMGAT00000024026	1211	256aa	ENSMGAP00000027896
-	ENSMGAT00000021444	3512	248aa	ENSMGAP00000024955
-	ENSMGAT00000022860	807	243aa	ENSMGAP00000020209

Gene Model

Click here to download ENSMGAG00000021654's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMGAG00000021654's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000015416	26.4706	12.3529	meleagris_gallopavo	ENSMGAP00000027896	17.5781	8.20312

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	46.0938	38.6719	caenorhabditis_elegans	C23G10.3.1	47.7733	40.081
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	48.4375	40.625	drosophila_melanogaster	FBpp0312066	50.4065	42.2764
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	48.4375	42.1875	ciona_intestinalis	ENSCINP00000010313	47.1483	41.0646
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	43.3594	40.625	petromyzon_marinus	ENSPMAP00000008596	55.5	52
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	40.2344	34.375	eptatretus_burgeri	ENSEBUP00000005415	56.9061	48.6188
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	52.3438	50	callorhinchus_milii	ENSCMIP00000043843	53.6	51.2
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	48.8281	47.2656	electrophorus_electricus	ENSEEEP00000050010	54.5852	52.8384
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	51.1719	48.0469	salmo_trutta	ENSSTUP00000047749	49.2481	46.2406
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	52.7344	49.2188	fundulus_heteroclitus	ENSFHEP00000034432	55.102	51.4286
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	51.5625	49.2188	notechis_scutatus	ENSNSUP00000023821	54.321	51.8519
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	51.5625	49.2188	pseudonaja_textilis	ENSPTXP00000021463	54.321	51.8519
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	31.25	28.5156	ailuropoda_melanoleuca	ENSAMEP00000007693	86.9565	79.3478
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	34.375	34.375	delphinapterus_leucas	ENSDLEP00000004689	94.6237	94.6237
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	45.7031	40.625	dasypus_novemcinctus	ENSDNOP00000030531	48.5477	43.1535
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	44.1406	38.2812	dasypus_novemcinctus	ENSDNOP00000022368	49.7797	43.1718
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	35.1562	34.375	gorilla_gorilla	ENSGGOP00000039304	77.5862	75.8621
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	31.25	30.4688	balaenoptera_musculus	ENSBMSP00010029302	93.0233	90.6977
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	27.7344	23.4375	balaenoptera_musculus	ENSBMSP00010013447	65.1376	55.0459
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	49.6094	44.9219	pan_troglodytes	ENSPTRP00000062099	47.037	42.5926
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	51.9531	48.0469	pan_troglodytes	ENSPTRP00000026978	49.6269	45.8955
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	31.6406	27.7344	pan_troglodytes	ENSPTRP00000076878	58.2734	51.0791
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	50	47.6562	camelus_dromedarius	ENSCDRP00005004685	44.2907	42.2145
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	28.5156	26.9531	ovis_aries_rambouillet	ENSOARP00020004567	69.5238	65.7143
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	40.625	40.2344	sarcophilus_harrisii	ENSSHAP00000027499	57.4586	56.9061
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	33.5938	30.4688	macaca_nemestrina	ENSMNEP00000021409	69.9187	63.4146
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	49.2188	44.9219	nomascus_leucogenys	ENSNLEP00000046818	48.4615	44.2308
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	35.1562	34.375	nomascus_leucogenys	ENSNLEP00000048836	68.1818	66.6667
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	42.1875	35.1562	bison_bison_bison	ENSBBBP00000021043	76.0563	63.3803
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	44.1406	40.625	mandrillus_leucophaeus	ENSMLEP00000016878	44.1406	40.625
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	34.7656	31.25	macaca_fascicularis	ENSMFAP00000004486	61.8056	55.5556
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	28.5156	25	bos_taurus	ENSBTAP00000067411	85.8824	75.2941
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	28.125	23.0469	felis_catus	ENSFCAP00000031202	76.5957	62.766
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	30.4688	28.5156	ursus_maritimus	ENSUMAP00000018377	84.7826	79.3478
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	5.46875	3.90625	sus_scrofa	ENSSSCP00000080961	10.687	7.63359
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	31.25	29.2969	ursus_americanus	ENSUAMP00000008796	86.9565	81.5217
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	34.7656	29.2969	capra_hircus	ENSCHIP00000024183	42.9952	36.2319
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	47.6562	41.7969	ciona_savignyi	ENSCSAVP00000005843	47.4708	41.6342
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	44.1406	41.0156	cercocebus_atys	ENSCATP00000029277	46.6942	43.3884
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	34.7656	31.25	cercocebus_atys	ENSCATP00000038390	61.8056	55.5556
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	48.4375	46.875	monodon_monoceros	ENSMMNP00015017835	79.4872	76.9231
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	37.8906	37.5	aotus_nancymaae	ENSANAP00000003886	95.098	94.1176
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	44.5312	40.2344	pongo_abelii	ENSPPYP00000037981	70.8075	63.9752
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	39.8438	37.1094	pongo_abelii	ENSPPYP00000035515	61.8182	57.5758
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	38.2812	36.7188	physeter_catodon	ENSPCTP00005026296	55.3672	53.1073
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	2.34375	0.78125	acanthochromis_polyacanthus	ENSAPOP00000000342	8.82353	2.94118
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	37.5	37.1094	acanthochromis_polyacanthus	ENSAPOP00000021148	96	95
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	33.5938	30.4688	panthera_pardus	ENSPPRP00000023523	66.6667	60.4651
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	28.5156	23.0469	panthera_pardus	ENSPPRP00000016140	76.8421	62.1053
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	34.7656	32.4219	cervus_hanglu_yarkandensis	ENSCHYP00000011192	78.0702	72.807
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	35.9375	35.1562	cervus_hanglu_yarkandensis	ENSCHYP00000026157	78.6325	76.9231
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	30.4688	29.2969	oryzias_melastigma	ENSOMEP00000012448	80.4124	77.3196
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	40.625	37.1094	peromyscus_maniculatus_bairdii	ENSPEMP00000023759	68.8742	62.9139
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	33.5938	31.25	vombatus_ursinus	ENSVURP00010023734	69.9187	65.0406
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	37.5	35.1562	dipodomys_ordii	ENSDORP00000017589	76.1905	71.4286
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	37.5	33.9844	sciurus_vulgaris	ENSSVLP00005016543	73.2824	66.4122
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	40.625	37.8906	sciurus_vulgaris	ENSSVLP00005022042	75.3623	70.2899
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	40.625	36.7188	tetraodon_nigroviridis	ENSTNIP00000008772	54.4503	49.2147
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	42.9688	34.7656	saccharomyces_cerevisiae	YNL178W	45.8333	37.0833
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	33.9844	33.9844	rattus_norvegicus	ENSRNOP00000094891	89.6907	89.6907
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	31.6406	29.2969	rattus_norvegicus	ENSRNOP00000088971	63.2812	58.5938
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	35.5469	31.25	otolemur_garnettii	ENSOGAP00000016162	77.7778	68.3761
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	39.4531	34.7656	jaculus_jaculus	ENSJJAP00000023571	70.6294	62.2378
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	44.1406	44.1406	rhinopithecus_bieti	ENSRBIP00000037360	79.021	79.021
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	35.1562	35.1562	propithecus_coquereli	ENSPCOP00000020030	96.7742	96.7742
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	42.1875	39.4531	callithrix_jacchus	ENSCJAP00000084801	68.3544	63.924
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	26.5625	23.0469	pundamilia_nyererei	ENSPNYP00000009854	79.0698	68.6047
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	52.3438	49.6094	nothobranchius_furzeri	ENSNFUP00015032038	53.1746	50.3968
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	28.5156	25	bos_indicus_hybrid	ENSBIXP00005033977	85.8824	75.2941
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	25.7812	23.4375	canis_lupus_familiaris	ENSCAFP00845035366	75	68.1818
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	41.4062	37.8906	microcebus_murinus	ENSMICP00000025588	43.8017	40.0826
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	29.2969	23.8281	panthera_leo	ENSPLOP00000015256	80.6452	65.5914
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	44.1406	44.1406	rhinopithecus_roxellana	ENSRROP00000032658	79.021	79.021
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	47.2656	44.9219	pan_paniscus	ENSPPAP00000020965	48.4	46
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	33.5938	29.2969	pan_paniscus	ENSPPAP00000004806	60.5634	52.8169
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	49.6094	44.9219	pan_paniscus	ENSPPAP00000033446	50.1976	45.4545
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	47.2656	46.4844	leptobrachium_leishanense	ENSLLEP00000009625	46.1832	45.4198
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	25.3906	24.2188	seriola_lalandi_dorsalis	ENSSLDP00000011405	86.6667	82.6667
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	50.3906	46.4844	oncorhynchus_tshawytscha	ENSOTSP00005076097	50.9881	47.0356
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	34.375	33.5938	octodon_degus	ENSODEP00000017786	74.5763	72.8814
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	25.7812	23.4375	canis_lupus_dingo	ENSCAFP00020005404	75	68.1818
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	30.8594	29.6875	phascolarctos_cinereus	ENSPCIP00000035653	76.699	73.7864
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	28.5156	25.7812	bos_mutus	ENSBMUP00000030561	85.8824	77.6471
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	33.9844	33.2031	phocoena_sinus	ENSPSNP00000031133	93.5484	91.3979
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	3.90625	1.5625	urocitellus_parryii	ENSUPAP00010004487	10.5263	4.21053
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	43.3594	38.2812	cebus_imitator	ENSCCAP00000010734	51.3889	45.3704
ENSMGAG00000021654	meleagris_gallopavo	ENSMGAP00000027896	33.2031	31.25	rhinolophus_ferrumequinum	ENSRFEP00010021039	72.6496	68.3761

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression